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Assembly Name: uagpf v2.0

Name: tRNA processing

Term: GO:0008033  Help

Source: GO from Blast2go

Ontology: Biological Process

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
uagpf_v2_unigene194 uagpf v2.0 390
• AutoFact: phenylalanyl-tRNA synthetase [Arabidopsis thaliana] sp|Q94K73.1|SYFM_ARATH RecName: Full=Phenylalanyl-tRNA synthetase, chloroplastic/mitochondrial; AltName: Full=Phenylalanine--tRNA ligase; Short=PheRS; Flags: Precursor gb|AAK44062.1|AF370247_1 putative p 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: phenylalanyl-trna chloroplastic mitochondrial-like 0.0
Internal
uagpf_v2_unigene551 uagpf v2.0 656
• AutoFact: phenylalanyl-tRNA synthetase [Arabidopsis thaliana] sp|Q94K73.1|SYFM_ARATH RecName: Full=Phenylalanyl-tRNA synthetase, chloroplastic/mitochondrial; AltName: Full=Phenylalanine--tRNA ligase; Short=PheRS; Flags: Precursor gb|AAK44062.1|AF370247_1 putative p 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: phenylalanyl-trna chloroplastic mitochondrial-like 0.0
C-terminus
uagpf_v2_unigene1272 uagpf v2.0 678
• AutoFact: RNase_P_Rpp14 domain containing protein 8.0e-10
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: unknown [Picea sitchensis] 0.0
Complete
uagpf_v2_unigene2128 uagpf v2.0 897
• AutoFact: putative GMP synthase [Arabidopsis thaliana] 0.0
• FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
• Blast2go: gmp synthase 0.0
C-terminus
uagpf_v2_unigene2463 uagpf v2.0 934
• AutoFact: Probable N(2),N(2)-dimethylguanosine tRNA methyltransferase 1 n=3 Tax=Arabidopsis RepID=TRM1_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: probable n -dimethylguanosine trna methyltransferase 1-like 0.0
Putative Complete
uagpf_v2_unigene2581 uagpf v2.0 665
• AutoFact: putative GMP synthase [Arabidopsis thaliana] 0.0
• FL-Next: tr=GMP synthase, putative; Ricinus communis (Castor bean). 0.0
• Blast2go: gmp synthase 0.0
N-terminus
uagpf_v2_unigene3373 uagpf v2.0 637
• AutoFact: putative GMP synthase [Arabidopsis thaliana] 0.0
• FL-Next: tr=Os08g0326600 protein; Oryza sativa subsp. japonica (Rice). 0.0
• Blast2go: gmp synthase 0.0
Internal
uagpf_v2_unigene3708 uagpf v2.0 598
• AutoFact: ribonuclease P subunit Rpp30 [Arabidopsis thaliana] gb|AED97261.1| ribonuclease P subunit Rpp30 [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: ribonuclease p subunit rpp30 0.0
N-terminus
uagpf_v2_unigene4011 uagpf v2.0 633
• AutoFact: tRNA-dihydrouridine synthase 3-like n=3 Tax=Arabidopsis RepID=DUS3L_ARATH 0.0
• FL-Next: sp=tRNA-dihydrouridine synthase 3-like; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: trna-dihydrouridine synthase 3-like protein 0.0
C-terminus
uagpf_v2_unigene4121 uagpf v2.0 779
• AutoFact: RNase_P_Rpp14 domain containing protein 8.0e-10
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: unknown [Picea sitchensis] 0.0
C-terminus
uagpf_v2_unigene4183 uagpf v2.0 664
• AutoFact: Poly(A) polymerase, putative n=1 Tax=Ricinus communis RepID=B9T6L0_RICCO 3.0e-14
• Blast2go: polynucleotide adenylyltransferase-like protein 5.56459e-15
unknown
uagpf_v2_unigene6849 uagpf v2.0 594
• AutoFact: Probable N(2),N(2)-dimethylguanosine tRNA methyltransferase 1 n=3 Tax=Arabidopsis RepID=TRM1_ARATH 0.0
• Blast2go: probable n -dimethylguanosine trna methyltransferase 1-like 0.0
unknown
uagpf_v2_unigene7097 uagpf v2.0 545
• AutoFact: tRNA-dihydrouridine synthase (Fragment) n=1 Tax=Vitis vinifera RepID=D7SVS8_VITVI 0.0
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: trna-dihydrouridine synthase 1-like 0.0
N-terminus
uagpf_v2_unigene8358 uagpf v2.0 655
• AutoFact: Pseudouridine synthase n=1 Tax=Picea sitchensis RepID=D5AA47_PICSI 0.0
• FL-Next: sp=Pseudouridine synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: trna pseudouridine synthase a-like 0.0
N-terminus
uagpf_v2_unigene11209 uagpf v2.0 1015
• AutoFact: geranylgeranyl hydrogenase [Glycine max] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: geranylgeranyl reductase 0.0
N-terminus
uagpf_v2_unigene11561 uagpf v2.0 479
• AutoFact: tRNA pseudouridine synthase family protein n=1 Tax=Cucumis melo subsp. melo RepID=E5GCD2_CUCME 0.0
• Blast2go: trna pseudouridine synthase 0.0
Putative coding
uagpf_v2_unigene12293 uagpf v2.0 665
• AutoFact: glycoprotease M22 family protein [Arabidopsis thaliana] ref|NP_974593.1| glycoprotease M22 family protein [Arabidopsis thaliana] emb|CAA16557.1| glycoprotein endopeptidase - like protein [Arabidopsis thaliana] emb|CAB79227.1| glycoprotein endopeptidase-li 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: glycoprotease m22 family protein 0.0
C-terminus
uagpf_v2_unigene16305 uagpf v2.0 1016
• AutoFact: geranylgeranyl hydrogenase [Glycine max] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: geranylgeranyl reductase 0.0
Putative C-terminus
uagpf_v2_unigene17418 uagpf v2.0 912
• AutoFact: Fruit protein PKIWI502, putative n=1 Tax=Ricinus communis RepID=B9T1V7_RICCO 0.0
• Blast2go: fruit protein pkiwi502 0.0
unknown
uagpf_v2_unigene27201 uagpf v2.0 458
• AutoFact: ATP binding protein, putative n=1 Tax=Ricinus communis RepID=B9SE49_RICCO 0.0
• Blast2go: trna dimethylallyltransferase 9 0.0
unknown

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain