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Assembly Name: uagpf v2.0

Name: tRNA processing

Term: GO:0008033  Help

Source: GO from Blast2go

Ontology: Biological Process

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
uagpf_v2_unigene28051 uagpf v2.0 313
• AutoFact: proteinaceous RNase P 1 [Arabidopsis thaliana] sp|Q66GI4.1|PP179_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g32230, mitochondrial; Flags: Precursor gb|AAU05541.1| At2g32230 [Arabidopsis thaliana] gb|AEC08652.1| proteinaceous RNase 0.0
• Blast2go: pentatricopeptide repeat-containing protein 0.0
unknown
uagpf_v2_unigene29593 uagpf v2.0 289
• AutoFact: Fruit protein PKIWI502, putative n=1 Tax=Ricinus communis RepID=B9T1V7_RICCO 0.0
• FL-Next: sp=Fruit protein pKIWI502; Actinidia deliciosa (Kiwi). 0.0
• Blast2go: fruit protein pkiwi502 0.0
Internal
uagpf_v2_unigene29736 uagpf v2.0 176
• AutoFact: Pseudouridine synthase n=1 Tax=Picea sitchensis RepID=D5AA47_PICSI 0.0
• FL-Next: sp=Pseudouridine synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: trna pseudouridine synthase a-like 0.0
C-terminus
uagpf_v2_unigene30632 uagpf v2.0 234
• AutoFact: ATP binding protein, putative n=1 Tax=Ricinus communis RepID=B9SE49_RICCO 0.0
• FL-Next: Isoform 2 of tRNA dimethylallyltransferase 9 OS=Arabidopsis thaliana GN=IPT9 0.0
• Blast2go: trna dimethylallyltransferase 9 0.0
Internal
uagpf_v2_unigene31270 uagpf v2.0 299
• AutoFact: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase, putative n=1 Tax=Ricinus communis RepID=B9RIE1_RICCO 0.0
• Blast2go: trna (5-methylaminomethyl-2-thiouridylate)-methyltransferase 0.0
unknown
uagpf_v2_unigene31638 uagpf v2.0 348
• AutoFact: glycoprotease M22 family protein [Arabidopsis thaliana] ref|NP_974593.1| glycoprotease M22 family protein [Arabidopsis thaliana] emb|CAA16557.1| glycoprotein endopeptidase - like protein [Arabidopsis thaliana] emb|CAB79227.1| glycoprotein endopeptidase-li 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: glycoprotease m22 family protein 0.0
Internal
uagpf_v2_unigene31963 uagpf v2.0 777
• AutoFact: Probable N(2),N(2)-dimethylguanosine tRNA methyltransferase 1 n=3 Tax=Arabidopsis RepID=TRM1_ARATH 0.0
• FL-Next: sp=Probable N(2),N(2)-dimethylguanosine tRNA methyltransferase 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: probable n -dimethylguanosine trna methyltransferase 1-like 0.0
Internal
uagpf_v2_unigene31988 uagpf v2.0 294
• AutoFact: Poly(A) polymerase, putative n=1 Tax=Ricinus communis RepID=B9T6L0_RICCO 3.0e-14
• Blast2go: polynucleotide adenylyltransferase-like protein 5.56459e-15
unknown
uagpf_v2_unigene34836 uagpf v2.0 432
• AutoFact: phenylalanyl-tRNA synthetase [Arabidopsis thaliana] sp|Q94K73.1|SYFM_ARATH RecName: Full=Phenylalanyl-tRNA synthetase, chloroplastic/mitochondrial; AltName: Full=Phenylalanine--tRNA ligase; Short=PheRS; Flags: Precursor gb|AAK44062.1|AF370247_1 putative p 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: phenylalanyl-trna chloroplastic mitochondrial-like 0.0
Internal
uagpf_v2_unigene37496 uagpf v2.0 300
• AutoFact: phenylalanyl-tRNA synthetase [Arabidopsis thaliana] sp|Q94K73.1|SYFM_ARATH RecName: Full=Phenylalanyl-tRNA synthetase, chloroplastic/mitochondrial; AltName: Full=Phenylalanine--tRNA ligase; Short=PheRS; Flags: Precursor gb|AAK44062.1|AF370247_1 putative p 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: phenylalanyl-trna chloroplastic mitochondrial-like 0.0
C-terminus
uagpf_v2_unigene39439 uagpf v2.0 293
• AutoFact: putative ribonuclease P/MRP protein subunit POP5 [Arabidopsis thaliana] sp|Q6AWV1.1|POP5_ARATH RecName: Full=Probable ribonuclease P/MRP protein subunit POP5; AltName: Full=Protein EMBRYO DEFECTIVE 1687 gb|AAT85743.1| At1g04635 [Arabidopsis thaliana] gb|A 9.0e-36
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
N-terminus
uagpf_v2_unigene39988 uagpf v2.0 186
• AutoFact: tRNA dimethylallyltransferase 2 [Arabidopsis thaliana] sp|Q9ZUX7.2|IPT2_ARATH RecName: Full=tRNA dimethylallyltransferase 2; AltName: Full=Isopentenyl-diphosphate: tRNA isopentenyltransferase 2; Short=AtIPT2; Short=IPP transferase 2; Short=IPPT 2 gb|AAF00 1.0e-36
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: trna isopentenyltransferase 0.0
Internal
uagpf_v2_unigene40125 uagpf v2.0 297
• AutoFact: tRNA dimethylallyltransferase 2 [Arabidopsis thaliana] sp|Q9ZUX7.2|IPT2_ARATH RecName: Full=tRNA dimethylallyltransferase 2; AltName: Full=Isopentenyl-diphosphate: tRNA isopentenyltransferase 2; Short=AtIPT2; Short=IPP transferase 2; Short=IPPT 2 gb|AAF00 1.0e-36
• Blast2go: trna isopentenyltransferase 0.0
unknown
uagpf_v2_unigene42257 uagpf v2.0 254
• AutoFact: Multidrug resistance pump, putative n=1 Tax=Ricinus communis RepID=B9SJ92_RICCO 0.0
• FL-Next: sp=Pentatricopeptide repeat-containing protein At2g32230, mitochondrial; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: pentatricopeptide repeat-containing protein mitochondrial-like 0.0
Internal
uagpf_v2_unigene43304 uagpf v2.0 312
• AutoFact: glycoprotease M22 family protein [Arabidopsis thaliana] ref|NP_974593.1| glycoprotease M22 family protein [Arabidopsis thaliana] emb|CAA16557.1| glycoprotein endopeptidase - like protein [Arabidopsis thaliana] emb|CAB79227.1| glycoprotein endopeptidase-li 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: glycoprotease m22 family protein 0.0
N-terminus
uagpf_v2_unigene44016 uagpf v2.0 320
• AutoFact: RecName: Full=tRNA-dihydrouridine synthase 3-like; AltName: Full=Zinc finger CCCH domain-containing protein 50; Short=AtC3H50 emb|CAB38623.1| putative protein [Arabidopsis thaliana] emb|CAB80552.1| putative protein [Arabidopsis thaliana] 0.0
• Blast2go: trna-dihydrouridine synthase 3-like 0.0
Coding
uagpf_v2_unigene44189 uagpf v2.0 294
• AutoFact: Pseudouridine synthase n=1 Tax=Picea sitchensis RepID=D5AA47_PICSI 0.0
• FL-Next: sp=Pseudouridine synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: trna pseudouridine synthase a-like 0.0
Internal
uagpf_v2_unigene50891 uagpf v2.0 383
• AutoFact: proteinaceous RNase P 1 [Arabidopsis thaliana] sp|Q66GI4.1|PP179_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g32230, mitochondrial; Flags: Precursor gb|AAU05541.1| At2g32230 [Arabidopsis thaliana] gb|AEC08652.1| proteinaceous RNase 0.0
• Blast2go: pentatricopeptide repeat-containing protein 0.0
Coding

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain