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Assembly Name: uagpf v2.0

Name: rRNA processing

Term: GO:0006364  Help

Source: GO from Blast2go

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene1446 uagpf v2.0 1022
AutoFact: Ribonucleoside-diphosphate reductase n=1 Tax=Musa acuminata RepID=Q6RZW3_MUSAC 0.0
FL-Next: sp=Ribonucleoside-diphosphate reductase large subunit; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: ribonucleoside-diphosphate reductase large subunit 0.0
C-terminus
uagpf_v2_unigene1624 uagpf v2.0 544
AutoFact: DUF947 domain containing protein 5.0e-34
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: uncharacterized protein 0.0
N-terminus
uagpf_v2_unigene1641 uagpf v2.0 1078
AutoFact: Probable fibrillarin (Fragment) n=2 Tax=Picea RepID=O65058_PICMA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
uagpf_v2_unigene2261 uagpf v2.0 755
AutoFact: TerC integral membrane domain-containing protein [Arabidopsis thaliana] gb|AED91766.1| TerC integral membrane domain-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: uncharacterized membrane protein stkorf319-like 0.0
C-terminus
uagpf_v2_unigene4010 uagpf v2.0 962
AutoFact: transducin family protein / WD-40 repeat family protein [Arabidopsis thaliana] gb|AAC63653.1| unknown protein [Arabidopsis thaliana] gb|AAM15129.1| unknown protein [Arabidopsis thaliana] gb|AEC10921.1| transducin family protein / WD-40 repeat family prote 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: u3 small nucleolar rna-associated protein 0.0
C-terminus
uagpf_v2_unigene4050 uagpf v2.0 672
AutoFact: haloacid dehalogenase-like hydrolase-like [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein At2g25870; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: haloacid dehalogenase-like hydrolase-like 0.0
C-terminus
uagpf_v2_unigene4830 uagpf v2.0 645
AutoFact: mRNA-binding protein precursor [Nicotiana tabacum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: mrna binding protein precursor-like 0.0
C-terminus
uagpf_v2_unigene5212 uagpf v2.0 842
AutoFact: putative U3 small nucleolar RNA-associated protein 11 [Arabidopsis thaliana] sp|Q9M223.1|UTP11_ARATH RecName: Full=Probable U3 small nucleolar RNA-associated protein 11; Short=U3 snoRNA-associated protein 11 emb|CAB81822.1| putative protein [Arabidopsis t 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: u3 small nucleolar rna-associated protein 11 0.0
N-terminus
uagpf_v2_unigene5255 uagpf v2.0 511
AutoFact: haloacid dehalogenase-like hydrolase domain-containing protein [Arabidopsis thaliana] gb|AAM20655.1| unknown protein [Arabidopsis thaliana] dbj|BAC43355.1| unknown protein [Arabidopsis thaliana] gb|ABO38782.1| At2g25870 [Arabidopsis thaliana] gb|AEC07765. 0.0
Blast2go: haloacid dehalogenase-like hydrolase-like 0.0
Putative coding
uagpf_v2_unigene5353 uagpf v2.0 421
AutoFact: Ribonucleoside-diphosphate reductase n=1 Tax=Musa acuminata RepID=Q6RZW3_MUSAC 0.0
Blast2go: ribonucleoside-diphosphate reductase large subunit 0.0
unknown
uagpf_v2_unigene6608 uagpf v2.0 562
AutoFact: S-adenosyl-L-methionine-dependent methyltransferase-like protein [Arabidopsis thaliana] dbj|BAA96951.1| protein carboxyl methylase-like [Arabidopsis thaliana] gb|AAL38734.1| putative protein carboxyl methylase [Arabidopsis thaliana] gb|AAM20006.1| putativ 0.0
Blast2go: protein 0.0
unknown
uagpf_v2_unigene7104 uagpf v2.0 565
AutoFact: DEAD-box ATP-dependent RNA helicase 36 [Arabidopsis thaliana] sp|Q9SA27.1|RH36_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 36 gb|AAD34681.1|AC006341_9 Similar to gb|L13612 DEAD-box protein (dbp45A) from Drosophila melanogaster and is a member 0.0
Blast2go: dead-box atp-dependent rna helicase 36-like 0.0
Putative coding
uagpf_v2_unigene7364 uagpf v2.0 561
AutoFact: Ribonucleoside-diphosphate reductase n=1 Tax=Musa acuminata RepID=Q6RZW3_MUSAC 0.0
FL-Next: sp=Ribonucleoside-diphosphate reductase large subunit; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: ribonucleoside-diphosphate reductase large subunit 0.0
C-terminus
uagpf_v2_unigene7369 uagpf v2.0 442
AutoFact: U3 ribonucleoprotein-like protein [Arabidopsis thaliana] gb|AEE82164.1| U3 ribonucleoprotein-like protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: u3 ribonucleoprotein family protein 0.0
Internal
uagpf_v2_unigene7444 uagpf v2.0 679
AutoFact: transducin family protein / WD-40 repeat family protein [Arabidopsis thaliana] gb|AAC63653.1| unknown protein [Arabidopsis thaliana] gb|AAM15129.1| unknown protein [Arabidopsis thaliana] gb|AEC10921.1| transducin family protein / WD-40 repeat family prote 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: u3 small nucleolar rna-associated protein 0.0
N-terminus
uagpf_v2_unigene8072 uagpf v2.0 389
AutoFact: pfam01370, Epimerase, NAD dependent epimerase/dehydratase family 4.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna binding protein 0.0
C-terminus
uagpf_v2_unigene8347 uagpf v2.0 419
AutoFact: Ribonucleoside-diphosphate reductase n=1 Tax=Musa acuminata RepID=Q6RZW3_MUSAC 0.0
FL-Next: sp=Ribonucleoside-diphosphate reductase large subunit; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: ribonucleoside-diphosphate reductase large subunit 0.0
Internal
uagpf_v2_unigene9350 uagpf v2.0 1812
AutoFact: transducin/WD40 domain-containing protein [Arabidopsis thaliana] emb|CAC01839.1| WD40-repeat protein [Arabidopsis thaliana] gb|AED92333.1| transducin/WD40 domain-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transducin beta-like protein 3-like 0.0
Putative C-terminus
uagpf_v2_unigene10051 uagpf v2.0 271
AutoFact: haloacid dehalogenase-like hydrolase-like [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: haloacid dehalogenase-like hydrolase-like 0.0
Internal
uagpf_v2_unigene10545 uagpf v2.0 814
AutoFact: pescadillo-like protein [Zinnia violacea] 0.0
FL-Next: sp=Pescadillo homolog; Chlamydomonas reinhardtii (Chlamydomonas smithii). 0.0
Blast2go: pescadillo-like protein 0.0
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain