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Assembly Name: uagpf v2.0

Name: structural constituent of ribosome

Term: GO:0003735  Help

Source: GO from Blast2go

Ontology: Molecular Function


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene27790 uagpf v2.0 469
AutoFact: Ribosomal_S21 domain containing protein 9.0e-07
Blast2go: ribosomal protein s21 family protein 0.0
unknown
uagpf_v2_unigene28055 uagpf v2.0 615
AutoFact: Actin-related protein 2 n=4 Tax=Poaceae RepID=ARP2_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: actin related protein 2 0.0
Internal
uagpf_v2_unigene28882 uagpf v2.0 583
AutoFact: Cationic amino acid transporter n=1 Tax=Populus trichocarpa RepID=B9GP57_POPTR 0.0
FL-Next: tr=Cationic amino acid transporter, putative; Ricinus communis (Castor bean). 0.0
Blast2go: uncharacterized amino acid permease -like 0.0
N-terminus
uagpf_v2_unigene29133 uagpf v2.0 329
AutoFact: 50S ribosomal protein L21 n=4 Tax=Andropogoneae RepID=B6TJJ8_MAIZE 4.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 50s ribosomal protein l21 0.0
Internal
uagpf_v2_unigene29276 uagpf v2.0 265
AutoFact: Ribosomal protein S3 n=8 Tax=Pinaceae RepID=D2DWK4_9CONI 0.0
FL-Next: tr=Ribosomal protein S3; Cathaya argyrophylla. Mitochondrion. 0.0
Blast2go: ribosomal protein s3 0.0
Internal
uagpf_v2_unigene29854 uagpf v2.0 190
AutoFact: RecName: Full=50S ribosomal protein L5, chloroplastic pdb|3BBO|H Chain H, Homology Model For The Spinach Chloroplast 50s Subunit Fitted To 9.4a Cryo-Em Map Of The 70s Chlororibosome 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 50s ribosomal protein l5 0.0
Internal
uagpf_v2_unigene30503 uagpf v2.0 540
AutoFact: 50S ribosomal protein L15, putative n=1 Tax=Ricinus communis RepID=B9T052_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: plastid ribosomal protein cl15 0.0
N-terminus
uagpf_v2_unigene30590 uagpf v2.0 342
AutoFact: replication factor C subunit 3 [Arabidopsis thaliana] gb|AAG51681.1|AC010704_25 putative replication factor C; 24844-22715 [Arabidopsis thaliana] gb|AAL38893.1| putative replication factor C [Arabidopsis thaliana] gb|AAM51357.1| putative replication facto 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: replication factor c subunit 5-like 0.0
N-terminus
uagpf_v2_unigene31375 uagpf v2.0 679
AutoFact: Ribosomal L18p/L5e family protein [Arabidopsis thaliana] dbj|BAB01882.1| unnamed protein product [Arabidopsis thaliana] gb|AAM63600.1| unknown [Arabidopsis thaliana] gb|AAN41334.1| unknown protein [Arabidopsis thaliana] dbj|BAH19862.1| AT3G20230 [Arabidop 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
uagpf_v2_unigene31711 uagpf v2.0 429
AutoFact: RecName: Full=40S ribosomal protein S23; AltName: Full=S12 gb|AAA79921.1| putative 40S ribosomal protein s12 [Fragaria x ananassa] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 40s ribosomal protein s23 0.0
N-terminus
uagpf_v2_unigene32520 uagpf v2.0 239
AutoFact: 50S ribosomal protein L19-1 [Arabidopsis thaliana] sp|Q8W463.1|RK191_ARATH RecName: Full=50S ribosomal protein L19-1, chloroplastic; Flags: Precursor gb|AAL32899.1| Unknown protein [Arabidopsis thaliana] gb|AAM10187.1| unknown protein [Arabidopsis thalian 1.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 50s ribosomal protein l19 0.0
N-terminus
uagpf_v2_unigene33751 uagpf v2.0 109
AutoFact: putative 30S ribosomal protein [Arabidopsis thaliana] gb|AAK43963.1|AF370148_1 unknown protein [Arabidopsis thaliana] gb|AAP04042.1| unknown protein [Arabidopsis thaliana] gb|AED93316.1| putative 30S ribosomal protein [Arabidopsis thaliana] 0.0
Blast2go: 30s ribosomal protein 0.0
unknown
uagpf_v2_unigene33752 uagpf v2.0 97
AutoFact: MAK16 protein-like protein [Arabidopsis thaliana] gb|AEE30367.1| MAK16 protein-like protein [Arabidopsis thaliana] 0.0
Blast2go: protein 0.0
unknown
uagpf_v2_unigene33869 uagpf v2.0 408
AutoFact: pfam03810, IBN_N, Importin-beta N-terminal domain 2.0e-09
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: protein 7.28675e-44
N-terminus
uagpf_v2_unigene35028 uagpf v2.0 126
AutoFact: MAK16 protein-like protein [Arabidopsis thaliana] gb|AEE30367.1| MAK16 protein-like protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
uagpf_v2_unigene36297 uagpf v2.0 489
AutoFact: Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein [Arabidopsis thaliana] emb|CAB38305.1| ribosomal-like protein [Arabidopsis thaliana] emb|CAB80431.1| ribosomal-like protein [Arabidopsis thaliana] gb|AAL67122.1| AT4g37660/F19F18_150 [Arabi 7.0e-32
FL-Next: sp=Cation/calcium exchanger 3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: 50s ribosomal protein l7 l12-like 1.4013e-45
C-terminus
uagpf_v2_unigene36375 uagpf v2.0 598
AutoFact: RecName: Full=50S ribosomal protein L5, chloroplastic pdb|3BBO|H Chain H, Homology Model For The Spinach Chloroplast 50s Subunit Fitted To 9.4a Cryo-Em Map Of The 70s Chlororibosome 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 50s ribosomal protein l5 0.0
Internal
uagpf_v2_unigene36642 uagpf v2.0 458
AutoFact: large subunit ribosomal protein L24e [Arabidopsis thaliana] ref|NP_001078059.1| large subunit ribosomal protein L24e [Arabidopsis thaliana] sp|O22165.1|RLP24_ARATH RecName: Full=Probable ribosome biogenesis protein RLP24 gb|AAC31838.1| 60S ribosomal prote 1.4013e-45
Blast2go: large subunit ribosomal protein l24e 0.0
Putative coding
uagpf_v2_unigene37314 uagpf v2.0 326
AutoFact: 30S ribosomal protein S5, putative n=1 Tax=Ricinus communis RepID=B9RBC3_RICCO 1.96182e-44
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 30s ribosomal protein s5 0.0
C-terminus
uagpf_v2_unigene37714 uagpf v2.0 268
AutoFact: Magnesium transporter CorA-like-like protein [Arabidopsis thaliana] gb|AAL85000.1| At2g04305/T23O15.7 [Arabidopsis thaliana] gb|AAO11621.1| At2g04305/T23O15.7 [Arabidopsis thaliana] gb|AEC05820.1| Magnesium transporter CorA-like-like protein [Arabidopsis 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: protein 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain