Sustainpine_db
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Assembly Name: uagpf v2.0

Name: intracellular part

Term: GO:0044424  Help

Source: GO from Blast2go

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene608 uagpf v2.0 184
AutoFact: Unassigned protein
Blast2go: protein 0.0
unknown
uagpf_v2_unigene1291 uagpf v2.0 604
AutoFact: pfam04146, YTH, YT521-B-like domain 0.0
Blast2go: uncharacterized protein 0.0
unknown
uagpf_v2_unigene2530 uagpf v2.0 520
AutoFact: pfam04146, YTH, YT521-B-like domain 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: uncharacterized protein 0.0
Internal
uagpf_v2_unigene2732 uagpf v2.0 1169
AutoFact: sirtuin 1 [Arabidopsis thaliana] gb|AAG44850.1|AF283757_1 sir2-like protein [Arabidopsis thaliana] dbj|BAB09243.1| transcription regulator Sir2-like protein [Arabidopsis thaliana] gb|AED96677.1| sirtuin 1 [Arabidopsis thaliana] 2.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: sirtuin 1 0.0
C-terminus
uagpf_v2_unigene3048 uagpf v2.0 464
AutoFact: winged-helix DNA-binding transcription factor family protein [Arabidopsis thaliana] gb|AAM10313.1| AT5g66100/K2A18_18 [Arabidopsis thaliana] gb|AAN31109.1| At5g66100/K2A18_18 [Arabidopsis thaliana] gb|AED98159.1| winged-helix DNA-binding transcription fac 5.0e-19
Blast2go: lupus la 9.83978e-38
unknown
uagpf_v2_unigene4527 uagpf v2.0 1356
AutoFact: putative 30S ribosomal protein S9 [Oryza sativa Japonica Group] dbj|BAD31103.1| putative 30S ribosomal protein S9 [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 30s ribosomal protein s9 0.0
Complete
uagpf_v2_unigene5043 uagpf v2.0 828
AutoFact: Glycine rich protein-like n=4 Tax=Arabidopsis RepID=Q8LAC6_ARATH 9.99967e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: u6 snrna-associated sm-like protein lsm4 0.0
Complete
uagpf_v2_unigene5534 uagpf v2.0 933
AutoFact: Ebola_NP domain containing protein 5.0e-06
FL-Next: tr=Putative uncharacterized protein; Pinus halepensis (Aleppo pine). 0.0
Blast2go: uncharacterized protein at5g39570-like 4.52195e-11
N-terminus
uagpf_v2_unigene5804 uagpf v2.0 521
AutoFact: putative immediate-early fungal elicitor protein CMPG1 [Oryza sativa Japonica Group] 5.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: immediate-early fungal elicitor protein cmpg1 5.40269e-19
C-terminus
uagpf_v2_unigene6060 uagpf v2.0 751
AutoFact: S15/NS1, RNA-binding protein [Arabidopsis thaliana] gb|AAF82151.1|AC034256_15 Contains similarity to an unknown protein T21F11.5 gi|6730725 from Arabidopsis thaliana BAC T21F11 gb|AC018849 and contains a Ribosomal Protein S15 PF|00312 domain gb|AAK32782.1 0.0
FL-Next: tr=Structural constituent of ribosome, putative; Ricinus communis (Castor bean). 0.0
Blast2go: s15 rna-binding protein 0.0
C-terminus
uagpf_v2_unigene6099 uagpf v2.0 512
AutoFact: inositol 5-phosphatase 1 [Dictyostelium discoideum] 5.0e-12
FL-Next: tr=Predicted protein; Micromonas pusilla (strain CCMP1545) (Picoplanktonic green alga). 0.0
Blast2go: protein 1.52555e-39
Putative C-terminus
uagpf_v2_unigene6969 uagpf v2.0 326
AutoFact: [O] COG5272 Ubiquitin 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ubiquitin 0.0
N-terminus
uagpf_v2_unigene7229 uagpf v2.0 436
AutoFact: RecName: Full=Polyubiquitin; Contains: RecName: Full=Ubiquitin; Flags: Precursor sp|P0CH05.1|UBI2P_PETCR RecName: Full=Polyubiquitin; Contains: RecName: Full=Ubiquitin; Flags: Precursor emb|CAA45621.1| polyubiquitin [Petroselinum crispum] emb|CAA45622.1| 0.0
FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: hexaubiquitin protein 0.0
Putative Complete
uagpf_v2_unigene7303 uagpf v2.0 462
AutoFact: Condensin complex subunit 1 (Fragment) n=1 Tax=Vitis vinifera RepID=D7TIM0_VITVI 0.0
Blast2go: condensin complex subunit 1 0.0
Coding
uagpf_v2_unigene9565 uagpf v2.0 474
AutoFact: WS02731.CR_G20 SS-IL-A-FL-14 Picea sitchensis cDNA clone WS02731_G20 3, mRNA sequence. 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: armadillo beta-catenin-like repeats-containing protein 0.0
Internal
uagpf_v2_unigene10728 uagpf v2.0 473
AutoFact: Tubulin beta-4 chain n=11 Tax=Eukaryota RepID=TBB4_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
uagpf_v2_unigene11014 uagpf v2.0 475
AutoFact: Armadillo/beta-catenin-like repeat-containing protein n=5 Tax=Arabidopsis RepID=Q8W498_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: protein 0.0
N-terminus
uagpf_v2_unigene11019 uagpf v2.0 586
AutoFact: RecName: Full=30S ribosomal protein 3, chloroplastic; AltName: Full=Plastid-specific 30S ribosomal protein 3; Short=PSRP-3; Flags: Precursor gb|AAF64163.1|AF239218_1 plastid-specific ribosomal protein 3 precursor [Spinacia oleracea] 5.0e-37
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: plastid-specific 30s ribosomal protein 3 0.0
N-terminus
uagpf_v2_unigene11996 uagpf v2.0 698
AutoFact: Ribosomal protein L37 n=1 Tax=Picea sitchensis RepID=A9NJS5_PICSI 1.99965e-42
FL-Next: sp=Ribosomal protein L37; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 60s ribosomal protein l37 0.0
Complete
uagpf_v2_unigene12353 uagpf v2.0 388
AutoFact: Transcription elongation factor (TFIIS) family protein [Arabidopsis thaliana] gb|AED91455.1| Transcription elongation factor (TFIIS) family protein [Arabidopsis thaliana] 2.99878e-43
Blast2go: transcription elongation expressed 0.0
unknown

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain