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Assembly Name: uagpf v2.0

Name: intracellular part

Term: GO:0044424  Help

Source: GO from Blast2go

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene19933 uagpf v2.0 1079
AutoFact: Tubulin beta-4 chain n=11 Tax=Eukaryota RepID=TBB4_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: beta chain 0.0
N-terminus
uagpf_v2_unigene19950 uagpf v2.0 788
AutoFact: 60s acidic ribosomal protein [Hyacinthus orientalis] 5.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 60s acidic ribosomal protein 3.98882e-30
Complete
uagpf_v2_unigene19951 uagpf v2.0 214
AutoFact: 60S ribosomal protein L37a, putative n=2 Tax=fabids RepID=B9RUR2_RICCO 2.94273e-44
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 60s ribosomal protein l37a 0.0
Putative Complete
uagpf_v2_unigene19977 uagpf v2.0 580
AutoFact: Tubulin beta-4 chain n=11 Tax=Eukaryota RepID=TBB4_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: beta-tubulin 2 0.0
N-terminus
uagpf_v2_unigene19985 uagpf v2.0 676
AutoFact: 60S ribosomal protein L44 [Phalaenopsis hybrid cultivar] 6.0e-40
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 60s ribosomal protein l44 0.0
Complete
uagpf_v2_unigene20095 uagpf v2.0 622
AutoFact: 60s acidic ribosomal protein [Hyacinthus orientalis] 5.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 60s acidic ribosomal protein 5.95133e-30
Putative Complete
uagpf_v2_unigene20108 uagpf v2.0 489
AutoFact: Tubulin beta-4 chain n=11 Tax=Eukaryota RepID=TBB4_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: beta chain 0.0
Internal
uagpf_v2_unigene20439 uagpf v2.0 953
AutoFact: polyubiquitin containing 7 ubiquitin monomers [Zea mays] 0.0
FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: ubiquitin 0.0
Complete
uagpf_v2_unigene20480 uagpf v2.0 823
AutoFact: polyubiquitin containing 7 ubiquitin monomers [Zea mays] 0.0
FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: ubiquitin 0.0
Putative Complete
uagpf_v2_unigene20495 uagpf v2.0 423
AutoFact: [O] COG5272 Ubiquitin 0.0
FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: ubiquitin 0.0
Putative Complete
uagpf_v2_unigene20496 uagpf v2.0 482
AutoFact: Polyubiquitin-C n=2 Tax=Sus scrofa RepID=UBC_PIG 0.0
FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: polyubiquitin 10 0.0
Putative Complete
uagpf_v2_unigene20522 uagpf v2.0 1034
AutoFact: [O] COG5272 Ubiquitin 0.0
FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: ubiquitin 0.0
Putative Complete
uagpf_v2_unigene20525 uagpf v2.0 821
AutoFact: RecName: Full=Polyubiquitin; Contains: RecName: Full=Ubiquitin; Flags: Precursor sp|P0CH05.1|UBI2P_PETCR RecName: Full=Polyubiquitin; Contains: RecName: Full=Ubiquitin; Flags: Precursor emb|CAA45621.1| polyubiquitin [Petroselinum crispum] emb|CAA45622.1| 0.0
FL-Next: tr=Ubiquitin; Hevea brasiliensis (Para rubber tree) (Siphonia brasiliensis). 0.0
Blast2go: hexaubiquitin protein 0.0
Complete
uagpf_v2_unigene20530 uagpf v2.0 533
AutoFact: RecName: Full=Polyubiquitin; Contains: RecName: Full=Ubiquitin; Flags: Precursor sp|P0CH05.1|UBI2P_PETCR RecName: Full=Polyubiquitin; Contains: RecName: Full=Ubiquitin; Flags: Precursor emb|CAA45621.1| polyubiquitin [Petroselinum crispum] emb|CAA45622.1| 0.0
FL-Next: tr=Polyubiquitin; Volvox carteri (Green alga). 0.0
Blast2go: hexaubiquitin protein 0.0
Complete
uagpf_v2_unigene20534 uagpf v2.0 751
AutoFact: [O] COG5272 Ubiquitin 0.0
FL-Next: tr=Polyubiquitin; Pinus sylvestris (Scots pine). 0.0
Blast2go: ubiquitin 0.0
Putative N-terminus
uagpf_v2_unigene26265 uagpf v2.0 457
AutoFact: BTB/POZ domain-containing protein [Dictyostelium discoideum AX4] gb|EAL61649.1| BTB/POZ domain-containing protein [Dictyostelium discoideum AX4] 3.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: btb poz domain-containing protein 0.0
C-terminus
uagpf_v2_unigene26474 uagpf v2.0 379
AutoFact: Ebola_NP domain containing protein 5.0e-06
Blast2go: uncharacterized protein at5g39570-like 4.52195e-11
unknown
uagpf_v2_unigene27711 uagpf v2.0 257
AutoFact: WS02731.CR_G20 SS-IL-A-FL-14 Picea sitchensis cDNA clone WS02731_G20 3, mRNA sequence. 0.0
FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
Blast2go: armadillo beta-catenin-like repeats-containing protein 0.0
Internal
uagpf_v2_unigene27874 uagpf v2.0 439
AutoFact: winged-helix DNA-binding transcription factor family protein [Arabidopsis thaliana] gb|AAM10313.1| AT5g66100/K2A18_18 [Arabidopsis thaliana] gb|AAN31109.1| At5g66100/K2A18_18 [Arabidopsis thaliana] gb|AED98159.1| winged-helix DNA-binding transcription fac 5.0e-19
Blast2go: lupus la 9.83978e-38
Putative coding
uagpf_v2_unigene28618 uagpf v2.0 654
AutoFact: RecName: Full=30S ribosomal protein 3, chloroplastic; AltName: Full=Plastid-specific 30S ribosomal protein 3; Short=PSRP-3; Flags: Precursor gb|AAF64163.1|AF239218_1 plastid-specific ribosomal protein 3 precursor [Spinacia oleracea] 5.0e-37
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: plastid-specific 30s ribosomal protein 3 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain