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Assembly Name: uagpf v2.0

Name: nucleoplasm

Term: GO:0005654  Help

Source: GO from Blast2go

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene31062 uagpf v2.0 208
AutoFact: histone H4 [Hyacinthus orientalis] 4.0e-38
Blast2go: histone h4 0.0
unknown
uagpf_v2_unigene31186 uagpf v2.0 327
AutoFact: actin-related protein 5 [Arabidopsis thaliana] sp|Q940Z2.2|ARP5_ARATH RecName: Full=Actin-related protein 5 dbj|BAB03145.1| actin-like protein [Arabidopsis thaliana] gb|ACV53017.1| actin-related protein 5 [Arabidopsis thaliana] gb|ACV53018.1| actin-relate 0.0
FL-Next: Isoform 2 of Actin-related protein 5 OS=Arabidopsis thaliana GN=ARP5 0.0
Blast2go: actin-related protein 5 0.0
Internal
uagpf_v2_unigene31659 uagpf v2.0 362
AutoFact: Cell division cycle protein 14 (Fragment) n=1 Tax=Chlamydomonas reinhardtii RepID=A8I465_CHLRE 0.0
Blast2go: cdc14b protein 0.0
Coding
uagpf_v2_unigene31870 uagpf v2.0 690
AutoFact: actin-related protein 5 [Arabidopsis thaliana] sp|Q940Z2.2|ARP5_ARATH RecName: Full=Actin-related protein 5 dbj|BAB03145.1| actin-like protein [Arabidopsis thaliana] gb|ACV53017.1| actin-related protein 5 [Arabidopsis thaliana] gb|ACV53018.1| actin-relate 0.0
FL-Next: Isoform 3 of Actin-related protein 5 OS=Arabidopsis thaliana GN=ARP5 0.0
Blast2go: actin-related protein 5 0.0
C-terminus
uagpf_v2_unigene33610 uagpf v2.0 244
AutoFact: Ubiquitin-60S ribosomal protein L40-1 n=69 Tax=Eukaryota RepID=RL40A_ARATH 0.0
Blast2go: ubiquitin a-52 residue ribosomal protein fusion product 1 0.0
unknown
uagpf_v2_unigene34867 uagpf v2.0 379
AutoFact: MAP7 multi-domain protein 2.0e-06
FL-Next: sp=Putative nuclear matrix constituent protein 1-like protein; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: branched-chain-amino-acid aminotransferase 5 1.35097e-25
Internal
uagpf_v2_unigene35336 uagpf v2.0 418
AutoFact: asymmetric leaves 2 [Carica papaya] 0.0
FL-Next: sp=LOB domain-containing protein 6; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: lob domain-containing protein 6 0.0
Putative C-terminus
uagpf_v2_unigene36626 uagpf v2.0 538
AutoFact: Asymmetric leaves 2 n=1 Tax=Carica papaya RepID=A7L4B2_CARPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
N-terminus
uagpf_v2_unigene36921 uagpf v2.0 468
AutoFact: asymmetric leaves 2 [Carica papaya] 0.0
Blast2go: lob domain-containing protein 6 0.0
unknown
uagpf_v2_unigene37778 uagpf v2.0 519
AutoFact: Ataxia telangiectasia mutated, putative n=1 Tax=Ricinus communis RepID=B9RB21_RICCO 0.0
FL-Next: sp=Serine/threonine-protein kinase ATM; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: serine-protein kinase atm 0.0
C-terminus
uagpf_v2_unigene44228 uagpf v2.0 419
AutoFact: Fanconi anemia group I protein isoform 1 [Homo sapiens] sp|Q9NVI1.4|FANCI_HUMAN RecName: Full=Fanconi anemia group I protein; Short=Protein FACI gb|ABQ63084.1| Fanconi anemia complementation group I [Homo sapiens] gb|AAI40770.1| FANCI protein [Homo sapien 1.0e-16
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: fanconi anemia group i protein 2.92861e-34
Putative N-terminus
uagpf_v2_unigene46138 uagpf v2.0 199
AutoFact: PREDICTED: Fanconi anemia, complementation group D2 n=1 Tax=Taeniopygia guttata RepID=UPI000194D2AA 3.0e-17
Blast2go: fanconi anemia group d2 protein 2.11479e-23
unknown
uagpf_v2_unigene48305 uagpf v2.0 387
AutoFact: Polyubiquitin 9 n=1 Tax=Arabidopsis thaliana RepID=UBQ9_ARATH 4.0e-20
FL-Next: sp=Ubiquitin; Avena sativa (Oat). 0.0
Blast2go: ubiquitin 1.50703e-25
Complete
uagpf_v2_unigene50453 uagpf v2.0 485
AutoFact: Asymmetric leaves 2 n=1 Tax=Carica papaya RepID=A7L4B2_CARPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative N-terminus
uagpf_v2_unigene50813 uagpf v2.0 377
AutoFact: partner of Y14-mago [Arabidopsis thaliana] ref|NP_849639.1| partner of Y14-mago [Arabidopsis thaliana] ref|NP_001031023.1| partner of Y14-mago [Arabidopsis thaliana] gb|AAF16626.1|AC011661_4 T23J18.7 [Arabidopsis thaliana] gb|AAO42233.1| unknown protein [ 9.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: partner of y14-mago 0.0
C-terminus
uagpf_v2_unigene54448 uagpf v2.0 668
AutoFact: histone H4 [Hyacinthus orientalis] 1.0e-38
FL-Next: sp=Histone H4; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: histone h4 0.0
Complete
uagpf_v2_unigene55891 uagpf v2.0 537
AutoFact: Histone H3 n=2 Tax=Pediculus humanus corporis RepID=E0V960_PEDHC 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h3 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain