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Assembly Name: uagpf v2.0

Name: circadian rhythm

Term: GO:0007623  Help

Source: GO from Blast2go

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene3409 uagpf v2.0 816
AutoFact: putative callose synthase 1 catalytic subunit [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transferring glycosyl 0.0
Putative Complete
uagpf_v2_unigene4668 uagpf v2.0 564
AutoFact: Timing of CAB expression 1 protein n=1 Tax=Castanea sativa RepID=Q56TL2_CASSA 0.0
Blast2go: two-component response regulator-like aprr1-like 0.0
unknown
uagpf_v2_unigene5059 uagpf v2.0 1060
AutoFact: GRAS family transcription factor n=1 Tax=Populus trichocarpa RepID=B9GPD0_POPTR 0.0
FL-Next: tr=SCARECROW; Pinus sylvestris (Scots pine). 0.0
Blast2go: gras family transcription factor 0.0
Putative C-terminus
uagpf_v2_unigene7714 uagpf v2.0 531
AutoFact: GRAS family transcription factor n=1 Tax=Populus trichocarpa RepID=B9GPD0_POPTR 0.0
FL-Next: tr=Putative uncharacterized protein; Ricinus communis (Castor bean). 0.0
Blast2go: gras family transcription factor 0.0
Internal
uagpf_v2_unigene8072 uagpf v2.0 389
AutoFact: pfam01370, Epimerase, NAD dependent epimerase/dehydratase family 4.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna binding protein 0.0
C-terminus
uagpf_v2_unigene10017 uagpf v2.0 434
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_3.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D7TK47_VITVI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: inward rectifying potassium channel 0.0
Internal
uagpf_v2_unigene10454 uagpf v2.0 294
AutoFact: protein plastid transcriptionally active 16 [Arabidopsis thaliana] emb|CAB51187.1| putative protein [Arabidopsis thaliana] gb|AEE78204.1| protein plastid transcriptionally active 16 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein plastid transcriptionally active 16 0.0
Internal
uagpf_v2_unigene11901 uagpf v2.0 1327
AutoFact: Adenine phosphoribosyltransferase 1 n=1 Tax=Elaeis guineensis RepID=B3TLV7_ELAGV 0.0
FL-Next: sp=Adenine phosphoribosyltransferase 1, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: adenine phosphoribosyltransferase 1 0.0
Complete
uagpf_v2_unigene13831 uagpf v2.0 311
AutoFact: Putative cytochrome P450 n=1 Tax=Arabidopsis thaliana RepID=Q56ZT5_ARATH 6.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cytochrome p450 2.24047e-14
Internal
uagpf_v2_unigene14908 uagpf v2.0 827
AutoFact: Unassigned protein
Blast2go: protein phytoclock 1 0.0
unknown
uagpf_v2_unigene17742 uagpf v2.0 333
AutoFact: transcription factor-like protein [Arabidopsis thaliana] gb|AED90905.1| transcription factor-like protein [Arabidopsis thaliana] 0.0
FL-Next: sp=NF-X1-type zinc finger protein NFXL2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: nuclear transcription x-box 0.0
Internal
uagpf_v2_unigene25397 uagpf v2.0 716
AutoFact: Timing of CAB expression 1 protein n=1 Tax=Castanea sativa RepID=Q56TL2_CASSA 0.0
Blast2go: two-component response regulator-like aprr1-like 0.0
Coding
uagpf_v2_unigene26918 uagpf v2.0 383
AutoFact: Unassigned protein
FL-Next: sp=Protein EARLY FLOWERING 3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein early flowering 3-like 9.54151e-23
Internal
uagpf_v2_unigene27364 uagpf v2.0 511
AutoFact: ribosomal RNA large subunit methyltransferase F [Arabidopsis thaliana] gb|AAU95411.1| At2g21070 [Arabidopsis thaliana] gb|AAV59276.1| At2g21070 [Arabidopsis thaliana] gb|AEC07118.1| ribosomal RNA large subunit methyltransferase F [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Ricinus communis (Castor bean). 0.0
Blast2go: ribosomal rna large subunit methyltransferase f 0.0
Putative N-terminus
uagpf_v2_unigene27932 uagpf v2.0 497
AutoFact: GTP binding protein, putative n=1 Tax=Ricinus communis RepID=B9SRI2_RICCO 0.0
FL-Next: Isoform 2 of Dynamin-like protein ARC5 OS=Arabidopsis thaliana GN=ARC5 0.0
Blast2go: gtp binding 0.0
C-terminus
uagpf_v2_unigene29259 uagpf v2.0 381
AutoFact: Peptidase C50, separase [Medicago truncatula] 4.0e-11
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: peptidase separase 1.55884e-15
Internal
uagpf_v2_unigene29636 uagpf v2.0 433
AutoFact: GTP binding protein, putative n=1 Tax=Ricinus communis RepID=B9SRI2_RICCO 0.0
FL-Next: sp=Dynamin-like protein ARC5; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: gtp binding 0.0
Internal
uagpf_v2_unigene31823 uagpf v2.0 267
AutoFact: serine/threonine-protein kinase WNK1 [Arabidopsis thaliana] sp|Q9CAV6.1|WNK1_ARATH RecName: Full=Serine/threonine-protein kinase WNK1; Short=AtWNK1; AltName: Full=Protein kinase with no lysine 1 gb|AAG51416.1|AC009465_16 putative mitogen activated protein 2.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: serine threonine-protein kinase wnk1 4.02018e-22
Internal
uagpf_v2_unigene34116 uagpf v2.0 421
AutoFact: phy rapidly regulated 2 protein [Arabidopsis thaliana] emb|CAB88302.1| putative protein [Arabidopsis thaliana] gb|AAR92241.1| At3g58850 [Arabidopsis thaliana] gb|AAS76234.1| At3g58850 [Arabidopsis thaliana] dbj|BAF01099.1| hypothetical protein [Arabidopsi 2.0e-07
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: phy rapidly regulated 2 protein 0.0
N-terminus
uagpf_v2_unigene35977 uagpf v2.0 462
AutoFact: Inward rectifying potassium channel n=1 Tax=Cucumis melo RepID=Q0R4Q4_CUCME 2.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: potassium channel 2.55815e-16
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain