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Assembly Name: uagpf v2.0

Name: cytoplasmic part

Term: GO:0044444  Help

Source: GO from Blast2go

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene31272 uagpf v2.0 626
AutoFact: nucleotide-diphospho-sugar transferase [Arabidopsis thaliana] gb|AEE36384.1| nucleotide-diphospho-sugar transferase [Arabidopsis thaliana] 0.0
Blast2go: n-acetylglucosaminyltransferase-like protein 0.0
unknown
uagpf_v2_unigene32194 uagpf v2.0 398
AutoFact: Nuclear matrix constituent-like protein 1 n=1 Tax=Cucumis melo subsp. melo RepID=E5GCT1_CUCME 8.0e-24
Blast2go: nuclear matrix constituent protein 1-like 1.51165e-30
unknown
uagpf_v2_unigene36071 uagpf v2.0 368
AutoFact: SRC2 protein n=1 Tax=Taiwania cryptomerioides RepID=A7XAJ8_9CONI 1.99965e-42
Blast2go: protein 0.0
unknown
uagpf_v2_unigene36548 uagpf v2.0 588
AutoFact: PREDICTED: similar to synaptotagmin binding, cytoplasmic RNA interacting protein, isoform 1 [Ornithorhynchus anatinus] 3.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: heterogeneous nuclear ribonucleoprotein q 0.0
N-terminus
uagpf_v2_unigene38612 uagpf v2.0 290
AutoFact: Probable galacturonosyltransferase 7 n=2 Tax=Arabidopsis RepID=GAUT7_ARATH 2.0e-22
FL-Next: sp=Probable galacturonosyltransferase 7; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: alpha- -galacturonosyltransferase 3.64835e-26
Internal
uagpf_v2_unigene42556 uagpf v2.0 370
AutoFact: ribosomal protein L34e-like protein [Arabidopsis thaliana] gb|AAS76274.1| At3g01170 [Arabidopsis thaliana] dbj|BAD43016.1| unknown protein [Arabidopsis thaliana] dbj|BAF01163.1| hypothetical protein [Arabidopsis thaliana] gb|AEE73619.1| ribosomal protein 6.0e-30
Blast2go: 60s ribosomal protein 0.0
unknown
uagpf_v2_unigene43312 uagpf v2.0 222
AutoFact: PREDICTED: similar to synaptotagmin binding, cytoplasmic RNA interacting protein, isoform 1 [Ornithorhynchus anatinus] 3.0e-31
Blast2go: heterogeneous nuclear ribonucleoprotein q 0.0
unknown
uagpf_v2_unigene43898 uagpf v2.0 411
AutoFact: ribosomal protein L34e-like protein [Arabidopsis thaliana] gb|AAS76274.1| At3g01170 [Arabidopsis thaliana] dbj|BAD43016.1| unknown protein [Arabidopsis thaliana] dbj|BAF01163.1| hypothetical protein [Arabidopsis thaliana] gb|AEE73619.1| ribosomal protein 6.0e-30
Blast2go: 60s ribosomal protein 0.0
unknown
uagpf_v2_unigene44818 uagpf v2.0 243
AutoFact: vacuolar protein sorting-associated protein 18 homolog [Danio rerio] sp|P59015.2|VPS18_DANRE RecName: Full=Vacuolar protein sorting-associated protein 18 homolog emb|CAI11898.1| vacuolar protein sorting protein 18 [Danio rerio] emb|CAI20654.1| vacuolar pr 4.0e-08
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: vacuolar protein sorting protein 18 2.42247e-24
Internal
uagpf_v2_unigene45530 uagpf v2.0 454
AutoFact: ubiquitin-protein ligase 1 [Arabidopsis thaliana] 2.0e-09
FL-Next: sp=E3 ubiquitin-protein ligase UPL1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: e3 ubiquitin-protein ligase upl1-like 3.92234e-21
Internal
uagpf_v2_unigene45890 uagpf v2.0 516
AutoFact: myosin heavy chain-related protein [Arabidopsis thaliana] gb|AEE85894.1| myosin heavy chain-related protein [Arabidopsis thaliana] 9.0e-10
Blast2go: protein 3.28213e-17
Coding
uagpf_v2_unigene46238 uagpf v2.0 416
AutoFact: Ribosomal protein S13, mitochondrial n=14 Tax=Magnoliophyta RepID=RT13_DAUCA 3.99931e-42
FL-Next: sp=Ribosomal protein S13, mitochondrial; Daucus carota (Carrot). Mitochondrion. 0.0
Blast2go: ribosomal protein s13 5.00264e-43
Putative N-terminus
uagpf_v2_unigene46491 uagpf v2.0 417
AutoFact: Serine carboxypeptidase-like enzyme n=2 Tax=Selaginella moellendorffii RepID=D8R643_SELML 7.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: serine carboxypeptidase-like enzyme 4.00285e-34
Internal
uagpf_v2_unigene48016 uagpf v2.0 256
AutoFact: Nuclear matrix constituent-like protein 1 n=1 Tax=Cucumis melo subsp. melo RepID=E5GCT1_CUCME 8.0e-24
Blast2go: nuclear matrix constituent protein 1-like 1.51165e-30
Coding
uagpf_v2_unigene49027 uagpf v2.0 311
AutoFact: AP-4 complex subunit sigma n=7 Tax=rosids RepID=AP4S_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ap-4 complex subunit sigma-1 0.0
Putative C-terminus
uagpf_v2_unigene49863 uagpf v2.0 420
AutoFact: Luminal binding protein n=3 Tax=Pinaceae RepID=Q40924_PSEMZ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: luminal binding protein 0.0
Internal
uagpf_v2_unigene50043 uagpf v2.0 391
AutoFact: 3-hydroxyisobutyryl-CoA hydrolase 1 [Arabidopsis thaliana] sp|Q9LKJ1.1|HIBC1_ARATH RecName: Full=3-hydroxyisobutyryl-CoA hydrolase 1; AltName: Full=CoA-thioester hydrolase CHY1 gb|AAF77193.1|AF276301_1 CoA-thioester hydrolase CHY1 [Arabidopsis thaliana] d 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 3-hydroxyisobutyryl-coenzyme a expressed 0.0
Putative C-terminus
uagpf_v2_unigene50089 uagpf v2.0 290
AutoFact: Nuclear matrix constituent-like protein 1 n=1 Tax=Cucumis melo subsp. melo RepID=E5GCT1_CUCME 8.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nuclear matrix constituent protein 1-like 1.51165e-30
Putative Complete
uagpf_v2_unigene50496 uagpf v2.0 258
AutoFact: cis-prenyltransferase, dehydrodolichyl diphosphate synthase [Arabidopsis thaliana] gb|AAN72032.1| Unknown protein [Arabidopsis thaliana] gb|AEE28780.1| cis-prenyltransferase, dehydrodolichyl diphosphate synthase [Arabidopsis thaliana] 9.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nogo-b receptor-like 0.0
C-terminus
uagpf_v2_unigene50850 uagpf v2.0 461
AutoFact: chaperone protein dnaJ 1 [Arabidopsis thaliana] gb|AAF98434.1|AC021044_13 Putative dnaJ protein [Arabidopsis thaliana] gb|AEE30932.1| chaperone protein dnaJ 1 [Arabidopsis thaliana] 2.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: chaperone protein 0.0
Putative N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain