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Assembly Name: uagpf v2.0

Name: pseudouridine synthesis

Term: GO:0001522  Help

Source: GO from Blast2go

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene5025 uagpf v2.0 886
AutoFact: RNA pseudourine synthase 1 n=1 Tax=Arabidopsis thaliana RepID=PUS1_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna pseudourine synthase 1-like 0.0
C-terminus
uagpf_v2_unigene5178 uagpf v2.0 264
AutoFact: RNA pseudourine synthase 5 [Arabidopsis thaliana] sp|Q5M721.2|PUS5_ARATH RecName: Full=RNA pseudourine synthase 5; AltName: Full=RNA pseudouridylate synthase 5; AltName: Full=RNA-uridine isomerase 5 gb|AEE78921.1| RNA pseudourine synthase 5 [Arabidopsis t 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna pseudourine synthase 5 0.0
C-terminus
uagpf_v2_unigene5629 uagpf v2.0 503
AutoFact: tRNA pseudouridine synthase d, putative n=1 Tax=Ricinus communis RepID=B9RER1_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: multisubstrate pseudouridine synthase 7-like 0.0
C-terminus
uagpf_v2_unigene8358 uagpf v2.0 655
AutoFact: Pseudouridine synthase n=1 Tax=Picea sitchensis RepID=D5AA47_PICSI 0.0
FL-Next: sp=Pseudouridine synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: trna pseudouridine synthase a-like 0.0
N-terminus
uagpf_v2_unigene8718 uagpf v2.0 732
AutoFact: suppressor of variegation1 causing pseudouridine synthase-like protein [Arabidopsis thaliana] gb|AAM66944.1| unknown [Arabidopsis thaliana] dbj|BAC42334.1| unknown protein [Arabidopsis thaliana] gb|AEC09639.1| suppressor of variegation1 causing pseudourid 0.0
FL-Next: tr=Putative uncharacterized protein At2g39150; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
C-terminus
uagpf_v2_unigene9054 uagpf v2.0 392
AutoFact: RNA pseudourine synthase 1 n=1 Tax=Arabidopsis thaliana RepID=PUS1_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna pseudourine synthase 1-like 0.0
Internal
uagpf_v2_unigene11561 uagpf v2.0 479
AutoFact: tRNA pseudouridine synthase family protein n=1 Tax=Cucumis melo subsp. melo RepID=E5GCD2_CUCME 0.0
Blast2go: trna pseudouridine synthase 0.0
Putative coding
uagpf_v2_unigene17418 uagpf v2.0 912
AutoFact: Fruit protein PKIWI502, putative n=1 Tax=Ricinus communis RepID=B9T1V7_RICCO 0.0
Blast2go: fruit protein pkiwi502 0.0
unknown
uagpf_v2_unigene29296 uagpf v2.0 375
AutoFact: tRNA pseudouridine synthase d, putative n=1 Tax=Ricinus communis RepID=B9RER1_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: multisubstrate pseudouridine synthase 7-like 0.0
Internal
uagpf_v2_unigene29593 uagpf v2.0 289
AutoFact: Fruit protein PKIWI502, putative n=1 Tax=Ricinus communis RepID=B9T1V7_RICCO 0.0
FL-Next: sp=Fruit protein pKIWI502; Actinidia deliciosa (Kiwi). 0.0
Blast2go: fruit protein pkiwi502 0.0
Internal
uagpf_v2_unigene29736 uagpf v2.0 176
AutoFact: Pseudouridine synthase n=1 Tax=Picea sitchensis RepID=D5AA47_PICSI 0.0
FL-Next: sp=Pseudouridine synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: trna pseudouridine synthase a-like 0.0
C-terminus
uagpf_v2_unigene40968 uagpf v2.0 440
AutoFact: tRNA pseudouridine synthase d, putative n=1 Tax=Ricinus communis RepID=B9RER1_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: multisubstrate pseudouridine synthase 7-like 0.0
Putative N-terminus
uagpf_v2_unigene44189 uagpf v2.0 294
AutoFact: Pseudouridine synthase n=1 Tax=Picea sitchensis RepID=D5AA47_PICSI 0.0
FL-Next: sp=Pseudouridine synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: trna pseudouridine synthase a-like 0.0
Internal
uagpf_v2_unigene47641 uagpf v2.0 217
AutoFact: Pseudouridine synthase family protein [Arabidopsis thaliana] gb|AEE29970.1| Pseudouridine synthase family protein [Arabidopsis thaliana] 0.0
Blast2go: trna pseudouridine synthase pus10-like 0.0
unknown

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain