Sustainpine_db
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Assembly Name: uagpf v2.0

Name: RNA binding

Term: GO:0003723  Help

Source: GO from Blast2go

Ontology: Molecular Function


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene53504 uagpf v2.0 327
AutoFact: splicing factor 3B subunit 4 [Arabidopsis thaliana] gb|AAD12222.1| putative spliceosome associated protein [Arabidopsis thaliana] gb|AAN12991.1| putative spliceosome-associated protein [Arabidopsis thaliana] gb|AEC06776.1| splicing factor 3B subunit 4 [Ar 0.0
FL-Next: tr=Spliceosome associated protein, putative; Ricinus communis (Castor bean). 0.0
Blast2go: splicing factor 3b subunit 4-like 0.0
Internal
uagpf_v2_unigene53817 uagpf v2.0 496
AutoFact: Zinc finger CCCH domain-containing protein 14 n=2 Tax=Oryza sativa RepID=C3H14_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: zinc finger ccch domain-containing protein 14-like 0.0
C-terminus
uagpf_v2_unigene54155 uagpf v2.0 405
AutoFact: Dead box ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9T0X5_RICCO 0.0
Blast2go: dead-box atp-dependent rna helicase 29-like 0.0
unknown
uagpf_v2_unigene54708 uagpf v2.0 362
AutoFact: U2 snrnp auxiliary factor, small subunit, putative n=1 Tax=Ricinus communis RepID=B9SRG2_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: u2 snrnp auxiliary small 0.0
C-terminus
uagpf_v2_unigene54870 uagpf v2.0 281
AutoFact: Nucleic acid binding NABP [Medicago truncatula] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pumilio homolog 2-like 0.0
Putative Complete
uagpf_v2_unigene55177 uagpf v2.0 472
AutoFact: Heterogeneous nuclear ribonucleoprotein A1/A3 n=2 Tax=Arabidopsis RepID=Q9FM47_ARATH 7.0e-38
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna recognition motif-containing protein 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain