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Assembly Name: uagpf v2.0

Name: ubiquitin-dependent protein catabolic process

Term: GO:0006511  Help

Source: GO from Blast2go

Ontology: Biological Process

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
uagpf_v2_unigene28172 uagpf v2.0 598
• AutoFact: 26S proteasome regulatory subunit N2 [Arabidopsis thaliana] gb|AAC04490.1| 26S proteasome regulatory subunit (RPN2), putative [Arabidopsis thaliana] gb|AAM20712.1| 26S proteasome regulatory subunit [Arabidopsis thaliana] gb|AEC08730.1| 26S proteasome regu 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: 26s proteasome regulatory subunit n2 0.0
Internal
uagpf_v2_unigene28676 uagpf v2.0 432
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: f-box lrr-repeat protein 14 0.0
Internal
uagpf_v2_unigene29229 uagpf v2.0 340
• AutoFact: Ubiquitin; TRAF-like [Medicago truncatula] 4.0e-38
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ubiquitin 0.0
Putative N-terminus
uagpf_v2_unigene29454 uagpf v2.0 228
• AutoFact: Ubiquitin carboxyl-terminal hydrolase (Fragment) n=2 Tax=Vitis vinifera RepID=D7SQ20_VITVI 0.0
• FL-Next: sp=Ubiquitin carboxyl-terminal hydrolase 24; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: ubiquitin carboxyl-terminal hydrolase 24 0.0
Internal
uagpf_v2_unigene29648 uagpf v2.0 467
• AutoFact: Cyclin-like F-box [Medicago truncatula] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: f-box family protein 0.0
Internal
uagpf_v2_unigene30216 uagpf v2.0 210
• AutoFact: putative ubiquitin-specific protease [Oryza sativa Japonica Group] 0.0
• Blast2go: ubiquitin carboxyl-terminal hydrolase 16-like 0.0
Coding
uagpf_v2_unigene30499 uagpf v2.0 435
• AutoFact: ubiquitin carboxyl-terminal hydrolase-like protein [Arabidopsis thaliana] gb|AAN31917.1| unknown protein [Arabidopsis thaliana] dbj|BAE98689.1| hypothetical protein [Arabidopsis thaliana] gb|AEE84587.1| ubiquitin carboxyl-terminal hydrolase-like protein [ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
N-terminus
uagpf_v2_unigene30861 uagpf v2.0 355
• AutoFact: Protein binding protein, putative n=1 Tax=Ricinus communis RepID=B9SRQ3_RICCO 0.0
• FL-Next: sp=E3 ubiquitin-protein ligase RKP; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: protein 0.0
Internal
uagpf_v2_unigene31640 uagpf v2.0 295
• AutoFact: putative ubiquitin-protein ligase 1 [Oryza sativa Japonica Group] 0.0
• FL-Next: sp=E3 ubiquitin-protein ligase UPL2; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: ubiquitin-protein ligase 1 0.0
Internal
uagpf_v2_unigene31707 uagpf v2.0 327
• AutoFact: Ubiquitin; TRAF-like [Medicago truncatula] 4.0e-38
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ubiquitin 0.0
C-terminus
uagpf_v2_unigene32116 uagpf v2.0 681
• AutoFact: Cyclin-like F-box [Medicago truncatula] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: f-box family protein 0.0
Putative C-terminus
uagpf_v2_unigene32146 uagpf v2.0 506
• AutoFact: 26S proteasome regulatory subunit N2 [Arabidopsis thaliana] gb|AAC04490.1| 26S proteasome regulatory subunit (RPN2), putative [Arabidopsis thaliana] gb|AAM20712.1| 26S proteasome regulatory subunit [Arabidopsis thaliana] gb|AEC08730.1| 26S proteasome regu 0.0
• Blast2go: 26s proteasome non-atpase regulatory subunit 1-like 0.0
unknown
uagpf_v2_unigene32984 uagpf v2.0 397
• AutoFact: ubiquitin carboxyl-terminal hydrolase [Arabidopsis thaliana] 0.0
• FL-Next: sp=Ubiquitin carboxyl-terminal hydrolase 13; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: ubiquitin carboxyl-terminal hydrolase 12-like 0.0
Internal
uagpf_v2_unigene33002 uagpf v2.0 352
• AutoFact: Cyclin-like F-box [Medicago truncatula] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: f-box family protein 0.0
Internal
uagpf_v2_unigene33312 uagpf v2.0 326
• AutoFact: F-box/LRR-repeat protein 3 [Arabidopsis thaliana] sp|Q8RWU5.1|FBL3_ARATH RecName: Full=F-box/LRR-repeat protein 3 gb|AAM14053.1| putative F-box protein family, AtFBL3 [Arabidopsis thaliana] gb|AAM67471.1| putative F-box family protein AtFBL3 [Arabidopsis 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Internal
uagpf_v2_unigene33636 uagpf v2.0 418
• AutoFact: Ubiquitin carboxyl-terminal hydrolase (Fragment) n=3 Tax=Vitis vinifera RepID=E0CRZ8_VITVI 0.0
• Blast2go: ubiquitin carboxyl-terminal hydrolase 23-like 0.0
Putative coding
uagpf_v2_unigene33644 uagpf v2.0 377
• AutoFact: ubiquitin carboxyl-terminal hydrolase-like protein [Arabidopsis thaliana] gb|AAN31917.1| unknown protein [Arabidopsis thaliana] dbj|BAE98689.1| hypothetical protein [Arabidopsis thaliana] gb|AEE84587.1| ubiquitin carboxyl-terminal hydrolase-like protein [ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Internal
uagpf_v2_unigene33867 uagpf v2.0 404
• AutoFact: Ubiquitin carboxyl-terminal hydrolase n=3 Tax=Physcomitrella patens subsp. patens RepID=A9SFU8_PHYPA 0.0
• FL-Next: sp=Ubiquitin carboxyl-terminal hydrolase 3; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: protein 0.0
N-terminus
uagpf_v2_unigene35643 uagpf v2.0 383
• AutoFact: Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Ricinus communis RepID=B9SWA7_RICCO 0.0
• FL-Next: sp=Ubiquitin carboxyl-terminal hydrolase 8; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: ubiquitin carboxyl-terminal hydrolase 5-like 0.0
Internal
uagpf_v2_unigene35770 uagpf v2.0 255
• AutoFact: ubiquitin carboxyl-terminal hydrolase [Arabidopsis thaliana] 0.0
• FL-Next: Isoform 2 of Ubiquitin carboxyl-terminal hydrolase 12 OS=Arabidopsis thaliana GN=UBP12 0.0
• Blast2go: ubiquitin carboxyl-terminal hydrolase 12-like 0.0
Putative C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain