Sustainpine_db
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Assembly Name: uagpf v2.0

Name: ubiquitin-dependent protein catabolic process

Term: GO:0006511  Help

Source: GO from Blast2go

Ontology: Biological Process

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
uagpf_v2_unigene20432 uagpf v2.0 385
• AutoFact: Polyubiquitin 14 n=9 Tax=core eudicotyledons RepID=UBQ14_ARATH 0.0
• FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Blast2go: polyubiquitin 0.0
Putative Complete
uagpf_v2_unigene20495 uagpf v2.0 423
• AutoFact: [O] COG5272 Ubiquitin 0.0
• FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Blast2go: ubiquitin 0.0
Putative Complete
uagpf_v2_unigene20496 uagpf v2.0 482
• AutoFact: Polyubiquitin-C n=2 Tax=Sus scrofa RepID=UBC_PIG 0.0
• FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Blast2go: polyubiquitin 10 0.0
Putative Complete
uagpf_v2_unigene20522 uagpf v2.0 1034
• AutoFact: [O] COG5272 Ubiquitin 0.0
• FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Blast2go: ubiquitin 0.0
Putative Complete
uagpf_v2_unigene20534 uagpf v2.0 751
• AutoFact: [O] COG5272 Ubiquitin 0.0
• FL-Next: tr=Polyubiquitin; Pinus sylvestris (Scots pine). 0.0
• Blast2go: ubiquitin 0.0
Putative N-terminus
uagpf_v2_unigene25218 uagpf v2.0 321
• AutoFact: Cyclin-like F-box [Medicago truncatula] 0.0
• Blast2go: f-box family protein 0.0
unknown
uagpf_v2_unigene25335 uagpf v2.0 532
• AutoFact: pfam03145, Sina, Seven in absentia protein family 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ubiquitin ligase 0.0
C-terminus
uagpf_v2_unigene25549 uagpf v2.0 523
• AutoFact: Ubiquitin; TRAF-like [Medicago truncatula] 4.0e-38
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ubiquitin 0.0
C-terminus
uagpf_v2_unigene25672 uagpf v2.0 534
• AutoFact: Ubiquitin carboxyl-terminal hydrolase (Fragment) n=2 Tax=Vitis vinifera RepID=D7SQ20_VITVI 0.0
• Blast2go: ubiquitin carboxyl-terminal hydrolase 24 0.0
Coding
uagpf_v2_unigene25902 uagpf v2.0 296
• AutoFact: putative ubiquitin-protein ligase 1 [Oryza sativa Japonica Group] 0.0
• FL-Next: tr=E3 ubiquitin protein ligase upl2, putative; Ricinus communis (Castor bean). 0.0
• Blast2go: ubiquitin-protein ligase 1 0.0
Internal
uagpf_v2_unigene26029 uagpf v2.0 645
• AutoFact: TIR1/AFB auxin receptor protein PintaAFB4A n=2 Tax=Pinus taeda RepID=C9EHS9_PINTA 0.0
• FL-Next: tr=TIR1/AFB auxin receptor protein PintaAFB4A; Pinus taeda (Loblolly pine). 0.0
• Blast2go: f-box family protein 0.0
Internal
uagpf_v2_unigene26136 uagpf v2.0 274
• AutoFact: putative ubiquitin carboxyl-terminal hydrolase [Arabidopsis thaliana] 0.0
• FL-Next: sp=Ubiquitin carboxyl-terminal hydrolase 13; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: ubiquitin carboxyl-terminal hydrolase 12-like 0.0
Internal
uagpf_v2_unigene26451 uagpf v2.0 393
• AutoFact: Unassigned protein
• Blast2go: protein 0.0
unknown
uagpf_v2_unigene26655 uagpf v2.0 552
• AutoFact: F-box/LRR-repeat protein 4 [Arabidopsis thaliana] sp|Q9C5D2.1|FBL4_ARATH RecName: Full=F-box/LRR-repeat protein 4; Short=AtFBL4 gb|AAK26038.1|AF360328_1 putative F-box protein family, AtFBL4 [Arabidopsis thaliana] gb|AAK32821.1|AF361808_1 AT4g15470/dl3775 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: f-box lrr-repeat protein 4-like 0.0
Internal
uagpf_v2_unigene26724 uagpf v2.0 507
• AutoFact: inactive ubiquitin carboxyl-terminal hydrolase 53 [Mus musculus] sp|P15975.2|UBP53_MOUSE RecName: Full=Inactive ubiquitin carboxyl-terminal hydrolase 53; AltName: Full=Inactive ubiquitin-specific peptidase 53; AltName: Full=Per-hexamer repeat protein 3 db 5.0e-30
• Blast2go: ubiquitin carboxyl-terminal hydrolase-related protein 0.0
unknown
uagpf_v2_unigene26749 uagpf v2.0 566
• AutoFact: 26S proteasome regulatory subunit N2 [Arabidopsis thaliana] gb|AAC04490.1| 26S proteasome regulatory subunit (RPN2), putative [Arabidopsis thaliana] gb|AAM20712.1| 26S proteasome regulatory subunit [Arabidopsis thaliana] gb|AEC08730.1| 26S proteasome regu 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: 26s proteasome regulatory subunit n2 0.0
N-terminus
uagpf_v2_unigene27418 uagpf v2.0 420
• AutoFact: Anaphase-promoting complex subunit 2 n=2 Tax=Arabidopsis RepID=APC2_ARATH 2.0e-10
• FL-Next: sp=Anaphase-promoting complex subunit 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: anaphase-promoting complex subunit 2.79441e-11
C-terminus
uagpf_v2_unigene27479 uagpf v2.0 260
• AutoFact: ubiquitin carboxyl-terminal hydrolase 12 [Arabidopsis thaliana] gb|AAK25908.1|AF360198_1 putative ubiquitin-specific protease UBP12 [Arabidopsis thaliana] gb|AAN13185.1| putative ubiquitin-specific protease UBP12 [Arabidopsis thaliana] gb|AED91040.1| ubiq 0.0
• Blast2go: ubiquitin carboxyl-terminal hydrolase 12 0.0
unknown
uagpf_v2_unigene27632 uagpf v2.0 560
• AutoFact: F-box/LRR-repeat protein 4 [Arabidopsis thaliana] sp|Q9C5D2.1|FBL4_ARATH RecName: Full=F-box/LRR-repeat protein 4; Short=AtFBL4 gb|AAK26038.1|AF360328_1 putative F-box protein family, AtFBL4 [Arabidopsis thaliana] gb|AAK32821.1|AF361808_1 AT4g15470/dl3775 0.0
• FL-Next: sp=F-box/LRR-repeat protein 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: f-box lrr-repeat protein 4-like 0.0
C-terminus
uagpf_v2_unigene28166 uagpf v2.0 563
• AutoFact: F-box protein FBW2 [Arabidopsis thaliana] ref|NP_849346.1| F-box protein FBW2 [Arabidopsis thaliana] ref|NP_974523.1| F-box protein FBW2 [Arabidopsis thaliana] ref|NP_001078359.1| F-box protein FBW2 [Arabidopsis thaliana] ref|NP_001154215.1| F-box protein 0.0
• FL-Next: sp=F-box protein FBW2; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: f-box protein fbw2 0.0
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain