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Assembly Name: uagpf v2.0

Name: nucleolus

Term: GO:0005730  Help

Source: GO from Blast2go

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene14074 uagpf v2.0 1099
AutoFact: 40S ribosomal protein S6 n=7 Tax=Spermatophyta RepID=RS6_ASPOF 0.0
FL-Next: sp=40S ribosomal protein S6; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
uagpf_v2_unigene14082 uagpf v2.0 662
AutoFact: 40S ribosomal protein S19-1 [Arabidopsis thaliana] sp|Q9SGA6.1|RS191_ARATH RecName: Full=40S ribosomal protein S19-1 gb|AAF14828.1|AC011664_10 putative 40S ribosomal protein S19 [Arabidopsis thaliana] gb|AAK44092.1|AF370277_1 putative 40S ribosomal protei 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 40s ribosomal protein s19 0.0
Complete
uagpf_v2_unigene14107 uagpf v2.0 833
AutoFact: RNA recognition motif-containing protein [Arabidopsis thaliana] ref|NP_974317.1| RNA recognition motif-containing protein [Arabidopsis thaliana] dbj|BAA97064.1| unnamed protein product [Arabidopsis thaliana] gb|AAL36202.1| putative RNA-binding protein [Ar 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna recognition motif-containing protein 0.0
C-terminus
uagpf_v2_unigene14128 uagpf v2.0 490
AutoFact: Chorismate synthase n=1 Tax=Picea sitchensis RepID=B8LL06_PICSI 0.0
FL-Next: sp=Chorismate synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: chorismate synthase 0.0
C-terminus
uagpf_v2_unigene14193 uagpf v2.0 842
AutoFact: pfam02731, SKIP_SNW, SKIP/SNW domain 0.0
FL-Next: tr=Nuclear protein skip, putative; Ricinus communis (Castor bean). 0.0
Blast2go: chromatin protein family 0.0
C-terminus
uagpf_v2_unigene14196 uagpf v2.0 1217
AutoFact: P18 n=1 Tax=Solanum chacoense RepID=Q6V9I5_SOLCH 4.06377e-44
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone deacetylase complex subunit sap18 0.0
Complete
uagpf_v2_unigene14294 uagpf v2.0 730
AutoFact: enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase [Arabidopsis thaliana] sp|Q9ZPI5.1|MFP2_ARATH RecName: Full=Peroxisomal fatty acid beta-oxidation multifunctional protein MFP2; Short=AtMPF2; Includes: RecName: Full=Enoyl-CoA hydratase/3-2-trans-enoyl-C 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: glyoxysomal fatty acid beta-oxidation multifunctional protein mfp-a 0.0
C-terminus
uagpf_v2_unigene14475 uagpf v2.0 905
AutoFact: ribosome biogenesis regulatory protein-like protein [Arabidopsis thaliana] sp|Q9SH88.2|RRS1_ARATH RecName: Full=Ribosome biogenesis regulatory protein homolog dbj|BAE98464.1| hypothetical protein [Arabidopsis thaliana] gb|AEC09475.1| ribosome biogenesis r 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ribosome biogenesis regulatory protein 0.0
C-terminus
uagpf_v2_unigene14549 uagpf v2.0 832
AutoFact: DNA helicase, TBP-interacting protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TL22_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna tbp-interacting protein 0.0
C-terminus
uagpf_v2_unigene14716 uagpf v2.0 667
AutoFact: mitochondrial prohibitin 1 [Petunia x hybrida] 0.0
Blast2go: protein 0.0
unknown
uagpf_v2_unigene14924 uagpf v2.0 1387
AutoFact: RNA binding protein-like protein n=1 Tax=Solanum tuberosum RepID=Q2VCH8_SOLTU 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: mki67 fha domain-interacting nucleolar phospho 0.0
Complete
uagpf_v2_unigene15025 uagpf v2.0 931
AutoFact: Pre-mRNA-processing factor 19 [Arabidopsis thaliana] sp|Q94BR4.1|PR19A_ARATH RecName: Full=Pre-mRNA-processing factor 19 homolog 1; AltName: Full=MOS4-associated complex protein 3A; Short=MAC protein 3A; AltName: Full=Plant U-box protein 59; AltName: Full 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ubiquitin-protein pub59 0.0
C-terminus
uagpf_v2_unigene15141 uagpf v2.0 456
AutoFact: Pre-mRNA-splicing factor SPF27-like protein [Arabidopsis thaliana] sp|Q949S9.1|SPF27_ARATH RecName: Full=Pre-mRNA-splicing factor SPF27 homolog; AltName: Full=Modifier of SNC1 member 4; AltName: Full=Protein BCAS2 homolog gb|AAK93587.1| unknown protein [A 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pre-mrna-splicing factor spf27-like protein 0.0
N-terminus
uagpf_v2_unigene15224 uagpf v2.0 410
AutoFact: Rrp15p multi-domain protein 8.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: uncharacterized protein 0.0
N-terminus
uagpf_v2_unigene15234 uagpf v2.0 616
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_77.assembly12x (Fragment) n=3 Tax=core eudicotyledons RepID=D7SY66_VITVI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
uagpf_v2_unigene15241 uagpf v2.0 805
AutoFact: H/ACA ribonucleoprotein complex subunit 4 [Arabidopsis thaliana] sp|Q9LD90.1|DKC1_ARATH RecName: Full=H/ACA ribonucleoprotein complex subunit 4; AltName: Full=Nopp-140-associated protein of 57 kDa homolog; Short=AtNAP57; AltName: Full=Nucleolar protein NA 0.0
FL-Next: sp=H/ACA ribonucleoprotein complex subunit 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
Internal
uagpf_v2_unigene15405 uagpf v2.0 1561
AutoFact: Nucleolar protein nop56, putative n=1 Tax=Ricinus communis RepID=B9RAI8_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
uagpf_v2_unigene15448 uagpf v2.0 689
AutoFact: 40S ribosomal protein S19-1 [Arabidopsis thaliana] sp|Q9SGA6.1|RS191_ARATH RecName: Full=40S ribosomal protein S19-1 gb|AAF14828.1|AC011664_10 putative 40S ribosomal protein S19 [Arabidopsis thaliana] gb|AAK44092.1|AF370277_1 putative 40S ribosomal protei 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 40s ribosomal protein s19 0.0
C-terminus
uagpf_v2_unigene15556 uagpf v2.0 1227
AutoFact: small nuclear ribonucleoprotein, putative [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: small nuclear ribonucleoprotein sm d3 0.0
Complete
uagpf_v2_unigene15694 uagpf v2.0 1984
AutoFact: putative arginine/serine-rich protein [Arabidopsis thaliana] 9.99967e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein arginine serine-rich 45 0.0
Putative Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain