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Assembly Name: uagpf v2.0

Name: nucleolus

Term: GO:0005730  Help

Source: GO from Blast2go

Ontology: Cellular Component

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
uagpf_v2_unigene53787 uagpf v2.0 370
• AutoFact: 40S ribosomal protein S18 [Arabidopsis thaliana] ref|NP_192718.1| 40S ribosomal protein S18 [Arabidopsis thaliana] ref|NP_564434.1| 40S ribosomal protein S18 [Arabidopsis thaliana] ref|XP_002872461.1| hypothetical protein ARALYDRAFT_489832 [Arabidopsis ly 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pointed first leaf 0.0
N-terminus
uagpf_v2_unigene53945 uagpf v2.0 557
• AutoFact: 60S ribosomal protein L11-1 n=51 Tax=Embryophyta RepID=RL111_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: 60s ribosomal protein l11 0.0
C-terminus
uagpf_v2_unigene53946 uagpf v2.0 725
• AutoFact: acetyl-CoA C-acyltransferase (EC 2.3.1.16) precursor - cucurbit dbj|BAA11117.1| 3-ketoacyl-CoA thiolase [Cucurbita cv. Kurokawa Amakuri] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: 3-ketoacyl- thiolase 0.0
C-terminus
uagpf_v2_unigene54005 uagpf v2.0 442
• AutoFact: Nucleolar protein nop56, putative n=1 Tax=Ricinus communis RepID=B9RAI8_RICCO 0.0
• Blast2go: protein 0.0
unknown
uagpf_v2_unigene54048 uagpf v2.0 369
• AutoFact: Eukaryotic translation initiation factor 6-2 n=8 Tax=Magnoliophyta RepID=IF62_ARATH 0.0
• Blast2go: eukaryotic translation initiation factor 6 0.0
unknown
uagpf_v2_unigene54051 uagpf v2.0 403
• AutoFact: Eukaryotic translation initiation factor 6-2 n=8 Tax=Magnoliophyta RepID=IF62_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: eukaryotic translation initiation factor 6 0.0
N-terminus
uagpf_v2_unigene54211 uagpf v2.0 634
• AutoFact: 40S ribosomal S4 protein [Glycine max] gb|ACU21252.1| unknown [Glycine max] 0.0
• FL-Next: tr=Low temprature induced-like protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Complete
uagpf_v2_unigene54225 uagpf v2.0 447
• AutoFact: 60S ribosomal protein L21 n=9 Tax=Poaceae RepID=Q9AV87_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: 60s ribosomal protein l21 0.0
C-terminus
uagpf_v2_unigene54289 uagpf v2.0 480
• AutoFact: 40S ribosomal protein S3a-2 [Arabidopsis thaliana] sp|Q42262.3|RS3A2_ARATH RecName: Full=40S ribosomal protein S3a-2 emb|CAA04689.1| Putative S-phase-specific ribosomal protein [Arabidopsis thaliana] emb|CAA18846.1| Putative S-phase-specific ribosomal pro 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: 40s ribosomal protein 0.0
N-terminus
uagpf_v2_unigene54381 uagpf v2.0 551
• AutoFact: DNA helicase, TBP-interacting protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RE67_PHYPA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ruvb-like 1-like 0.0
Putative C-terminus
uagpf_v2_unigene54448 uagpf v2.0 668
• AutoFact: histone H4 [Hyacinthus orientalis] 1.0e-38
• FL-Next: sp=Histone H4; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Blast2go: histone h4 0.0
Complete
uagpf_v2_unigene54493 uagpf v2.0 302
• AutoFact: 40S ribosomal protein S19-1 [Arabidopsis thaliana] sp|Q9SGA6.1|RS191_ARATH RecName: Full=40S ribosomal protein S19-1 gb|AAF14828.1|AC011664_10 putative 40S ribosomal protein S19 [Arabidopsis thaliana] gb|AAK44092.1|AF370277_1 putative 40S ribosomal protei 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: 40s ribosomal protein s19 0.0
C-terminus
uagpf_v2_unigene54625 uagpf v2.0 541
• AutoFact: chaperonin-60 beta subunit [Solanum tuberosum] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: tcp-1 cpn60 chaperonin family protein 0.0
C-terminus
uagpf_v2_unigene54721 uagpf v2.0 339
• AutoFact: Mitochondrial F0 ATP synthase D chain n=1 Tax=Elaeis guineensis RepID=B3TLP5_ELAGV 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: atp synthase d mitochondrial 0.0
C-terminus
uagpf_v2_unigene54877 uagpf v2.0 347
• AutoFact: lipoamide dehydrogenase 1 [Arabidopsis thaliana] gb|AEE75888.1| lipoamide dehydrogenase 1 [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: dihydrolipoyl dehydrogenase-like 0.0
C-terminus
uagpf_v2_unigene54970 uagpf v2.0 395
• AutoFact: acetyl-CoA C-acyltransferase (EC 2.3.1.16) precursor - cucurbit dbj|BAA11117.1| 3-ketoacyl-CoA thiolase [Cucurbita cv. Kurokawa Amakuri] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: 3-ketoacyl- thiolase 0.0
Complete
uagpf_v2_unigene55035 uagpf v2.0 290
• AutoFact: lipoamide dehydrogenase 1 [Arabidopsis thaliana] gb|AEE75888.1| lipoamide dehydrogenase 1 [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: dihydrolipoyl dehydrogenase-like 0.0
C-terminus
uagpf_v2_unigene55062 uagpf v2.0 454
• AutoFact: Eukaryotic translation initiation factor 6-2 n=8 Tax=Magnoliophyta RepID=IF62_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: eukaryotic translation initiation factor 6 0.0
C-terminus
uagpf_v2_unigene55181 uagpf v2.0 525
• AutoFact: Mitochondrial F0 ATP synthase D chain n=1 Tax=Elaeis guineensis RepID=B3TLP5_ELAGV 4.0e-39
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: atp synthase subunit d 0.0
N-terminus
uagpf_v2_unigene55195 uagpf v2.0 465
• AutoFact: small nuclear ribonucleoprotein D2 [Arabidopsis thaliana] ref|NP_973710.1| small nuclear ribonucleoprotein D2 [Arabidopsis thaliana] ref|NP_001078331.1| small nuclear ribonucleoprotein D2 [Arabidopsis thaliana] emb|CAB83134.1| small nuclear ribonucleoprot 1.4013e-45
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: small nuclear ribonucleo protein 0.0
Putative N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain