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Assembly Name: uagpf v2.0

Name: nucleolus

Term: GO:0005730  Help

Source: GO from Blast2go

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene46193 uagpf v2.0 258
AutoFact: FVE n=2 Tax=Papilionoideae RepID=Q52ZH8_PEA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nucleosome chromatin assembly factor group 0.0
N-terminus
uagpf_v2_unigene46713 uagpf v2.0 144
AutoFact: Actin related protein n=2 Tax=Malpighiales RepID=B9I2R4_POPTR 0.0
Blast2go: actin-related protein 0.0
unknown
uagpf_v2_unigene47294 uagpf v2.0 292
AutoFact: zinc finger protein 330 variant [Homo sapiens] 0.0
Blast2go: zinc finger protein 330 0.0
unknown
uagpf_v2_unigene47734 uagpf v2.0 526
AutoFact: Heat-shock protein-like protein n=1 Tax=Cucumis melo subsp. melo RepID=Q84KA7_CUCME 0.0
FL-Next: tr=Putative uncharacterized protein; Ricinus communis (Castor bean). 0.0
Blast2go: alpha-crystallin domain of heat shock protein-containing protein 0.0
Internal
uagpf_v2_unigene48822 uagpf v2.0 332
AutoFact: WD-repeat protein, putative n=1 Tax=Ricinus communis RepID=B9S0D0_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: wd repeat-containing protein 3-like 0.0
Putative C-terminus
uagpf_v2_unigene49095 uagpf v2.0 121
AutoFact: Histone H2B n=1 Tax=Arabidopsis lyrata subsp. lyrata RepID=D7MWT0_ARALL 1.99993e-41
Blast2go: histone h2b 0.0
unknown
uagpf_v2_unigene49574 uagpf v2.0 597
AutoFact: 40S ribosomal protein S3a-2 [Arabidopsis thaliana] sp|Q42262.3|RS3A2_ARATH RecName: Full=40S ribosomal protein S3a-2 emb|CAA04689.1| Putative S-phase-specific ribosomal protein [Arabidopsis thaliana] emb|CAA18846.1| Putative S-phase-specific ribosomal pro 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 40s ribosomal protein 0.0
C-terminus
uagpf_v2_unigene49590 uagpf v2.0 806
AutoFact: 40S ribosomal protein S30 [Arabidopsis thaliana] ref|NP_200478.1| 40S ribosomal protein S30 [Arabidopsis thaliana] ref|NP_565458.1| 40S ribosomal protein S30 [Arabidopsis thaliana] ref|XP_002866160.1| 40S ribosomal protein S30 [Arabidopsis lyrata subsp. l 9.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 40s ribosomal protein s30 3.75936e-26
Complete
uagpf_v2_unigene49690 uagpf v2.0 382
AutoFact: U1snRNP-specific protein, U1A n=1 Tax=Solanum tuberosum RepID=Q41498_SOLTU 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: small nuclear ribonucleoprotein u1a 0.0
C-terminus
uagpf_v2_unigene49913 uagpf v2.0 450
AutoFact: Rrp15p multi-domain protein 8.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: uncharacterized protein 0.0
N-terminus
uagpf_v2_unigene49936 uagpf v2.0 598
AutoFact: DNA helicase, TBP-interacting protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TL22_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna tbp-interacting protein 0.0
N-terminus
uagpf_v2_unigene49966 uagpf v2.0 358
AutoFact: multiprotein-bridging factor 1c [Arabidopsis thaliana] sp|Q9LV58.1|MBF1C_ARATH RecName: Full=Multiprotein-bridging factor 1c dbj|BAB01997.1| ethylene-responsive transcriptional coactivator-like protein [Arabidopsis thaliana] gb|AAO44027.1| At3g24500 [Arab 0.0
Blast2go: ethylene-responsive transciptional coactivator-like protein 0.0
unknown
uagpf_v2_unigene50105 uagpf v2.0 343
AutoFact: Mitochondrial processing peptidase beta subunit n=1 Tax=Cucumis melo RepID=Q9AXQ2_CUCME 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: mitochondrial processing peptidase 0.0
Internal
uagpf_v2_unigene50215 uagpf v2.0 495
AutoFact: putative pre-rRNA processing protein, 5' partial [Arabidopsis thaliana] 7.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein rrp5 homolog 9.86014e-33
N-terminus
uagpf_v2_unigene50230 uagpf v2.0 219
AutoFact: oligosaccharyltransferase complex subunit beta [Arabidopsis thaliana] gb|AAL16268.1|AF428338_1 AT5g66680/MSN2_7 [Arabidopsis thaliana] gb|AAN12926.1| putative dolichyl-di-phosphooligosaccharide glycotransferase (oligosaccharyltransferase) [Arabidopsis tha 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kda subunit 0.0
Internal
uagpf_v2_unigene50582 uagpf v2.0 243
AutoFact: Rrp15p multi-domain protein 8.0e-25
Blast2go: uncharacterized protein 0.0
unknown
uagpf_v2_unigene50632 uagpf v2.0 530
AutoFact: large subunit ribosomal protein L24e [Arabidopsis thaliana] ref|NP_001078059.1| large subunit ribosomal protein L24e [Arabidopsis thaliana] sp|O22165.1|RLP24_ARATH RecName: Full=Probable ribosome biogenesis protein RLP24 gb|AAC31838.1| 60S ribosomal prote 6.00036e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: large subunit ribosomal protein l24e 0.0
C-terminus
uagpf_v2_unigene50813 uagpf v2.0 377
AutoFact: partner of Y14-mago [Arabidopsis thaliana] ref|NP_849639.1| partner of Y14-mago [Arabidopsis thaliana] ref|NP_001031023.1| partner of Y14-mago [Arabidopsis thaliana] gb|AAF16626.1|AC011661_4 T23J18.7 [Arabidopsis thaliana] gb|AAO42233.1| unknown protein [ 9.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: partner of y14-mago 0.0
C-terminus
uagpf_v2_unigene50858 uagpf v2.0 395
AutoFact: BRI1-KD interacting protein 132 [Oryza sativa Japonica Group] 3.0e-33
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: nucleolar and coiled-body phosphoprotein 7.79612e-41
C-terminus
uagpf_v2_unigene50882 uagpf v2.0 238
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_5.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D7U2L0_VITVI 2.0e-11
Blast2go: pre-mrna-splicing factor atp-dependent rna helicase 4.2284e-14
unknown

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain