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Assembly Name: uagpf v2.0

Name: nucleolus

Term: GO:0005730  Help

Source: GO from Blast2go

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene36427 uagpf v2.0 479
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_77.assembly12x (Fragment) n=3 Tax=core eudicotyledons RepID=D7SY66_VITVI 0.0
FL-Next: sp=Importin subunit alpha-1a; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: protein 0.0
Internal
uagpf_v2_unigene36618 uagpf v2.0 427
AutoFact: WD40 domain-containing protein [Arabidopsis thaliana] gb|AAU94425.1| At1g65030 [Arabidopsis thaliana] gb|AEE34317.1| WD40 domain-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: p21-activated protein kinase-interacting protein 1-like 0.0
Internal
uagpf_v2_unigene36642 uagpf v2.0 458
AutoFact: large subunit ribosomal protein L24e [Arabidopsis thaliana] ref|NP_001078059.1| large subunit ribosomal protein L24e [Arabidopsis thaliana] sp|O22165.1|RLP24_ARATH RecName: Full=Probable ribosome biogenesis protein RLP24 gb|AAC31838.1| 60S ribosomal prote 1.4013e-45
Blast2go: large subunit ribosomal protein l24e 0.0
Putative coding
uagpf_v2_unigene36759 uagpf v2.0 443
AutoFact: DUF1253 multi-domain protein 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: digestive organ expansion factor-like protein 0.0
Putative C-terminus
uagpf_v2_unigene37388 uagpf v2.0 438
AutoFact: pfam00270, DEAD, DEAD/DEAH box helicase 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
uagpf_v2_unigene37409 uagpf v2.0 429
AutoFact: Histone H2B.10 n=5 Tax=Arabidopsis RepID=H2B10_ARATH 1.99993e-41
Blast2go: histone h2b like protein 0.0
unknown
uagpf_v2_unigene37695 uagpf v2.0 415
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: uncharacterized protein 5.99444e-20
N-terminus
uagpf_v2_unigene37858 uagpf v2.0 477
AutoFact: Formin-like protein 1 n=3 Tax=Oryza sativa RepID=FH1_ORYSJ 4.0e-21
Blast2go: formin-like protein 6 6.81476e-21
unknown
uagpf_v2_unigene37992 uagpf v2.0 385
AutoFact: histone H4 [Hyacinthus orientalis] 5.0e-38
Blast2go: histone h4 0.0
unknown
uagpf_v2_unigene38086 uagpf v2.0 408
AutoFact: N-acetyl-gamma-glutamyl-phosphate reductase n=1 Tax=Picea sitchensis RepID=A9NUH1_PICSI 0.0
FL-Next: sp=N-acetyl-gamma-glutamyl-phosphate reductase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: n-acetyl-gamma-glutamyl-phosphate reductase 0.0
Internal
uagpf_v2_unigene38159 uagpf v2.0 291
AutoFact: Serine/threonine protein kinase, putative n=1 Tax=Ricinus communis RepID=B9SWQ3_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein kinase g11a-like 0.0
Internal
uagpf_v2_unigene38268 uagpf v2.0 410
AutoFact: FVE n=2 Tax=Papilionoideae RepID=Q52ZH8_PEA 0.0
FL-Next: sp=WD-40 repeat-containing protein MSI4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: nucleosome chromatin assembly factor group 0.0
Putative N-terminus
uagpf_v2_unigene38275 uagpf v2.0 493
AutoFact: DNA helicase, TBP-interacting protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TL22_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna tbp-interacting protein 0.0
N-terminus
uagpf_v2_unigene38308 uagpf v2.0 393
AutoFact: Elongation factor Tu n=3 Tax=Spermatophyta RepID=A9NWL9_PICSI 0.0
FL-Next: sp=Elongation factor Tu; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: elongation factor chloroplastic-like 0.0
Internal
uagpf_v2_unigene38392 uagpf v2.0 368
AutoFact: pescadillo-like protein [Zinnia violacea] 0.0
FL-Next: sp=Pescadillo homolog; Chlamydomonas reinhardtii (Chlamydomonas smithii). 0.0
Blast2go: pescadillo-like protein 0.0
Internal
uagpf_v2_unigene38706 uagpf v2.0 417
AutoFact: large subunit ribosomal protein L24e [Arabidopsis thaliana] ref|NP_001078059.1| large subunit ribosomal protein L24e [Arabidopsis thaliana] sp|O22165.1|RLP24_ARATH RecName: Full=Probable ribosome biogenesis protein RLP24 gb|AAC31838.1| 60S ribosomal prote 1.4013e-45
Blast2go: large subunit ribosomal protein l24e 0.0
Coding
uagpf_v2_unigene38894 uagpf v2.0 478
AutoFact: Formin-like (Fragment) n=3 Tax=Pseudotsuga menziesii var. menziesii RepID=Q5MDY9_PSEMZ 2.0e-36
Blast2go: formin-like 5.60519e-45
unknown
uagpf_v2_unigene39230 uagpf v2.0 423
AutoFact: Actin related protein n=2 Tax=Malpighiales RepID=B9I2R4_POPTR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: actin-related protein 0.0
Internal
uagpf_v2_unigene39469 uagpf v2.0 315
AutoFact: Cell division control protein 48 homolog D n=25 Tax=Magnoliophyta RepID=CD48D_ARATH 2.0e-10
FL-Next: sp=Cell division control protein 48 homolog D; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: cell division cycle protein 48 homolog 1.1276e-13
Putative N-terminus
uagpf_v2_unigene40240 uagpf v2.0 265
AutoFact: autophagy regulatory protein (ISS) [Ostreococcus tauri] emb|CAL51693.1| autophagy regulatory protein (ISS) [Ostreococcus tauri] 4.0e-26
Blast2go: protein autophagy 2 0.0
Coding

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain