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Assembly Name: uagpf v2.0

Name: nucleolus

Term: GO:0005730  Help

Source: GO from Blast2go

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene33714 uagpf v2.0 444
AutoFact: Herpes_gp2 multi-domain protein 2.0e-06
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
uagpf_v2_unigene33933 uagpf v2.0 194
AutoFact: 40S ribosomal protein S20-1 n=12 Tax=rosids RepID=RS201_ARATH 0.0
Blast2go: 40s ribosomal protein s20 0.0
unknown
uagpf_v2_unigene34386 uagpf v2.0 250
AutoFact: H/ACA ribonucleoprotein complex subunit 1-like protein 1 n=5 Tax=Andropogoneae RepID=B6TFJ5_MAIZE 1.0e-13
FL-Next: sp=Putative H/ACA ribonucleoprotein complex subunit 1-like protein 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: h aca ribonucleoprotein complex subunit 1-like protein 1 1.11472e-17
Internal
uagpf_v2_unigene34997 uagpf v2.0 367
AutoFact: transducin family protein / WD-40 repeat family protein [Arabidopsis thaliana] gb|AAC63653.1| unknown protein [Arabidopsis thaliana] gb|AAM15129.1| unknown protein [Arabidopsis thaliana] gb|AEC10921.1| transducin family protein / WD-40 repeat family prote 0.0
Blast2go: u3 small nucleolar rna-associated protein 0.0
Putative coding
uagpf_v2_unigene35042 uagpf v2.0 136
AutoFact: chaperonin-60 beta subunit [Solanum tuberosum] 0.0
Blast2go: tcp-1 cpn60 chaperonin family protein 0.0
unknown
uagpf_v2_unigene35100 uagpf v2.0 441
AutoFact: pfam02731, SKIP_SNW, SKIP/SNW domain 0.0
FL-Next: tr=Putative uncharacterized protein Sb04g033860; Sorghum bicolor (Sorghum) (Sorghum vulgare). 0.0
Blast2go: chromatin protein family 0.0
Internal
uagpf_v2_unigene35355 uagpf v2.0 83
AutoFact: Chorismate synthase n=1 Tax=Picea sitchensis RepID=B8LL06_PICSI 0.0
FL-Next: sp=Chorismate synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: chorismate synthase 0.0
N-terminus
uagpf_v2_unigene35671 uagpf v2.0 316
AutoFact: Mitochondrial processing peptidase beta subunit n=1 Tax=Cucumis melo RepID=Q9AXQ2_CUCME 0.0
Blast2go: mitochondrial processing peptidase 0.0
unknown
uagpf_v2_unigene35746 uagpf v2.0 315
AutoFact: C2H2-type zinc finger protein, putative n=1 Tax=Arabidopsis thaliana RepID=Q9C7G8_ARATH 2.0e-12
FL-Next: tr=At1g72050; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: transcription factor iiia 1.2588e-13
N-terminus
uagpf_v2_unigene35977 uagpf v2.0 462
AutoFact: Inward rectifying potassium channel n=1 Tax=Cucumis melo RepID=Q0R4Q4_CUCME 2.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: potassium channel 2.55815e-16
C-terminus
uagpf_v2_unigene36053 uagpf v2.0 522
AutoFact: 40S ribosomal protein S18 [Arabidopsis thaliana] ref|NP_192718.1| 40S ribosomal protein S18 [Arabidopsis thaliana] ref|NP_564434.1| 40S ribosomal protein S18 [Arabidopsis thaliana] ref|XP_002872461.1| hypothetical protein ARALYDRAFT_489832 [Arabidopsis ly 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pointed first leaf 0.0
C-terminus
uagpf_v2_unigene36060 uagpf v2.0 1982
AutoFact: Elongation factor 2 n=32 Tax=Magnoliophyta RepID=EF2_BETVU 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: elongation factor ef-2 0.0
Internal
uagpf_v2_unigene36090 uagpf v2.0 496
AutoFact: Putative glycine-rich protein n=1 Tax=Picea glauca RepID=Q3HRT2_PICGL 2.0e-40
Blast2go: protein 0.0
unknown
uagpf_v2_unigene36120 uagpf v2.0 687
AutoFact: 26S protease regulatory subunit 10B homolog A n=2 Tax=Arabidopsis RepID=PS10A_ARATH 0.0
Blast2go: 26s protease regulatory subunit 0.0
unknown
uagpf_v2_unigene36138 uagpf v2.0 367
AutoFact: 40S ribosomal protein S19-1 [Arabidopsis thaliana] sp|Q9SGA6.1|RS191_ARATH RecName: Full=40S ribosomal protein S19-1 gb|AAF14828.1|AC011664_10 putative 40S ribosomal protein S19 [Arabidopsis thaliana] gb|AAK44092.1|AF370277_1 putative 40S ribosomal protei 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 40s ribosomal protein s19 0.0
C-terminus
uagpf_v2_unigene36140 uagpf v2.0 839
AutoFact: multiprotein-bridging factor 1c [Arabidopsis thaliana] sp|Q9LV58.1|MBF1C_ARATH RecName: Full=Multiprotein-bridging factor 1c dbj|BAB01997.1| ethylene-responsive transcriptional coactivator-like protein [Arabidopsis thaliana] gb|AAO44027.1| At3g24500 [Arab 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ethylene-responsive transciptional coactivator-like protein 0.0
Complete
uagpf_v2_unigene36154 uagpf v2.0 685
AutoFact: Mitochondrial processing peptidase beta subunit n=1 Tax=Cucumis melo RepID=Q9AXQ2_CUCME 0.0
FL-Next: sp=Probable mitochondrial-processing peptidase subunit beta; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: mitochondrial processing peptidase 0.0
C-terminus
uagpf_v2_unigene36164 uagpf v2.0 732
AutoFact: oligosaccharyltransferase complex subunit beta [Arabidopsis thaliana] gb|AAL16268.1|AF428338_1 AT5g66680/MSN2_7 [Arabidopsis thaliana] gb|AAN12926.1| putative dolichyl-di-phosphooligosaccharide glycotransferase (oligosaccharyltransferase) [Arabidopsis tha 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kda subunit 0.0
Putative N-terminus
uagpf_v2_unigene36179 uagpf v2.0 469
AutoFact: U1snRNP-specific protein, U1A n=1 Tax=Solanum tuberosum RepID=Q41498_SOLTU 0.0
Blast2go: small nuclear ribonucleoprotein u1a 0.0
unknown
uagpf_v2_unigene36322 uagpf v2.0 719
AutoFact: Arsenite-resistance protein, putative n=1 Tax=Ricinus communis RepID=B9S6M6_RICCO 0.0
Blast2go: serrate rna effector molecule-like 0.0
unknown

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain