|
Sequence
|
Assembly
|
Length (nt)
|
|
Full-Length
|
|
uagpf_v2_unigene4898
|
uagpf v2.0
|
541
|
|
• AutoFact: 8-oxoguanine DNA glycosylase, putative n=1 Tax=Ricinus communis RepID=B9S2W7_RICCO
|
2.0e-24
|
|
• Blast2go: n-glycosylase dna lyase
|
7.42815e-29
|
|
Putative coding
|
|
uagpf_v2_unigene6731
|
uagpf v2.0
|
485
|
|
• AutoFact: transcription initiation factor TFIIH subunit H2 [Arabidopsis thaliana] gb|AAM90909.1|AF499443_1 p44/SSL1-like protein [Arabidopsis thaliana] gb|AAC97995.1| Similar to gb|Z30094 basic transcripion factor 2, 44 kD subunit from Homo sapiens. EST gb|W43325 c
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape).
|
0.0
|
|
• Blast2go: general transcription factor iih subunit 2-like
|
0.0
|
|
C-terminus
|
|
uagpf_v2_unigene9102
|
uagpf v2.0
|
1013
|
|
• AutoFact: ATP-dependent Clp protease ATP-binding subunit clpA homolog CD4B, chloroplastic n=3 Tax=core eudicotyledons RepID=CLPAB_SOLLC
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: chaperone protein chloroplastic-like
|
0.0
|
|
C-terminus
|
|
uagpf_v2_unigene11464
|
uagpf v2.0
|
501
|
|
• AutoFact: Predicted protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9T079_PHYPA
|
0.0
|
|
• FL-Next: sp=DNA repair helicase UVH6; Arabidopsis thaliana (Mouse-ear cress).
|
0.0
|
|
• Blast2go: dna repair helicase uvh6
|
0.0
|
|
Putative N-terminus
|
|
uagpf_v2_unigene11486
|
uagpf v2.0
|
570
|
|
• AutoFact: ATP-dependent Clp protease ATP-binding subunit clpA homolog CD4B, chloroplastic n=3 Tax=core eudicotyledons RepID=CLPAB_SOLLC
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: chaperone protein chloroplastic-like
|
0.0
|
|
N-terminus
|
|
uagpf_v2_unigene11902
|
uagpf v2.0
|
712
|
|
• AutoFact: RecName: Full=ATP-dependent Clp protease ATP-binding subunit clpA homolog CD4B, chloroplastic; Flags: Precursor gb|AAA34161.1| ATP-dependent protease (CD4B) [Solanum lycopersicum]
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: chaperone protein chloroplastic-like
|
0.0
|
|
C-terminus
|
|
uagpf_v2_unigene14079
|
uagpf v2.0
|
526
|
|
• AutoFact: ATP-dependent Clp protease ATP-binding subunit clpA homolog CD4B, chloroplastic n=3 Tax=core eudicotyledons RepID=CLPAB_SOLLC
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: chaperone protein chloroplastic-like
|
0.0
|
|
C-terminus
|
|
uagpf_v2_unigene16361
|
uagpf v2.0
|
715
|
|
• AutoFact: transcription initiation factor TFIIH subunit H2 [Arabidopsis thaliana] gb|AAM90909.1|AF499443_1 p44/SSL1-like protein [Arabidopsis thaliana] gb|AAC97995.1| Similar to gb|Z30094 basic transcripion factor 2, 44 kD subunit from Homo sapiens. EST gb|W43325 c
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape).
|
0.0
|
|
• Blast2go: general transcription factor iih subunit 2-like
|
0.0
|
|
Putative Complete
|
|
uagpf_v2_unigene25600
|
uagpf v2.0
|
435
|
|
• AutoFact: rad1; RAD1 DNA repair protein homolog; K10848 DNA excision repair protein ERCC-4 [EC:3.1.-.-]
|
0.0
|
|
• FL-Next: sp=DNA repair endonuclease UVH1; Arabidopsis thaliana (Mouse-ear cress).
|
0.0
|
|
• Blast2go: dna repair endonuclease uvh1
|
0.0
|
|
Putative C-terminus
|
|
uagpf_v2_unigene26578
|
uagpf v2.0
|
373
|
|
• AutoFact: DNA repair and transcription factor XPB1 (ISS) [Ostreococcus tauri] emb|CAL53063.1| DNA repair and transcription factor XPB1 (ISS) [Ostreococcus tauri]
|
0.0
|
|
• Blast2go: protein
|
0.0
|
|
unknown
|
|
uagpf_v2_unigene27039
|
uagpf v2.0
|
319
|
|
• AutoFact: rad1; RAD1 DNA repair protein homolog; K10848 DNA excision repair protein ERCC-4 [EC:3.1.-.-]
|
0.0
|
|
• Blast2go: dna repair endonuclease uvh1
|
0.0
|
|
unknown
|
|
uagpf_v2_unigene30184
|
uagpf v2.0
|
249
|
|
• AutoFact: nucleotide excision repair protein XP-D homolog [Arabidopsis thaliana]
|
0.0
|
|
• FL-Next: sp=DNA repair helicase UVH6; Arabidopsis thaliana (Mouse-ear cress).
|
0.0
|
|
• Blast2go: dna repair helicase uvh6
|
0.0
|
|
Putative C-terminus
|
|
uagpf_v2_unigene31000
|
uagpf v2.0
|
452
|
|
• AutoFact: DNA repair and transcription factor XPB1 (ISS) [Ostreococcus tauri] emb|CAL53063.1| DNA repair and transcription factor XPB1 (ISS) [Ostreococcus tauri]
|
0.0
|
|
• Blast2go: protein
|
0.0
|
|
unknown
|
|
uagpf_v2_unigene31025
|
uagpf v2.0
|
184
|
|
• AutoFact: pfam08755, YccV-like, Hemimethylated DNA-binding protein YccV like
|
5.0e-30
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: uvrb uvrc motif-containing protein
|
0.0
|
|
Internal
|
|
uagpf_v2_unigene31054
|
uagpf v2.0
|
264
|
|
• AutoFact: RecName: Full=ATP-dependent Clp protease ATP-binding subunit clpA homolog CD4B, chloroplastic; Flags: Precursor gb|AAA34161.1| ATP-dependent protease (CD4B) [Solanum lycopersicum]
|
0.0
|
|
• FL-Next: sp=ATP-dependent Clp protease ATP-binding subunit clpA homolog CD4B, chloroplastic; Solanum lycopersicum (Tomato) (Lycopersicon esculentum).
|
0.0
|
|
• Blast2go: chaperone protein chloroplastic-like
|
0.0
|
|
Internal
|
|
uagpf_v2_unigene35246
|
uagpf v2.0
|
257
|
|
• AutoFact: ATP-dependent Clp protease ATP-binding subunit clpA homolog CD4B, chloroplastic n=3 Tax=core eudicotyledons RepID=CLPAB_SOLLC
|
0.0
|
|
• FL-Next: sp=Chaperone protein ClpC1, chloroplastic; Oryza sativa subsp. japonica (Rice).
|
0.0
|
|
• Blast2go: chaperone protein chloroplastic-like
|
0.0
|
|
Internal
|
|
uagpf_v2_unigene35648
|
uagpf v2.0
|
133
|
|
• AutoFact: 8-oxoguanine DNA glycosylase, putative n=1 Tax=Ricinus communis RepID=B9S2W7_RICCO
|
2.0e-24
|
|
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape).
|
0.0
|
|
• Blast2go: n-glycosylase dna lyase
|
7.42815e-29
|
|
Internal
|
|
uagpf_v2_unigene36959
|
uagpf v2.0
|
450
|
|
• AutoFact: pfam08755, YccV-like, Hemimethylated DNA-binding protein YccV like
|
5.0e-30
|
|
• Blast2go: uvrb uvrc motif-containing protein
|
0.0
|
|
unknown
|
|
uagpf_v2_unigene37015
|
uagpf v2.0
|
664
|
|
• AutoFact: ATP-dependent Clp protease ATP-binding subunit clpA homolog CD4B, chloroplastic n=3 Tax=core eudicotyledons RepID=CLPAB_SOLLC
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: chaperone protein chloroplastic-like
|
0.0
|
|
Internal
|
|
uagpf_v2_unigene37688
|
uagpf v2.0
|
536
|
|
• AutoFact: DNA repair and transcription factor XPB1 (ISS) [Ostreococcus tauri] emb|CAL53063.1| DNA repair and transcription factor XPB1 (ISS) [Ostreococcus tauri]
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: protein
|
0.0
|
|
Internal
|
