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Assembly Name: uagpf v2.0

Name: chloroplast thylakoid lumen

Term: GO:0009543  Help

Source: GO from Blast2go

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene932 uagpf v2.0 521
AutoFact: Electron transporter, putative n=1 Tax=Ricinus communis RepID=B9SPX9_RICCO 0.0
Blast2go: uncharacterized protein 0.0
unknown
uagpf_v2_unigene994 uagpf v2.0 718
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: sdl-1 protein 0.0
Putative N-terminus
uagpf_v2_unigene1399 uagpf v2.0 642
AutoFact: thylakoid lumenal protein [Arabidopsis thaliana] sp|Q9SW33.1|TL1Y_ARATH RecName: Full=Thylakoid lumenal 17.9 kDa protein, chloroplastic; Flags: Precursor emb|CAB36735.1| hypothetical protein [Arabidopsis thaliana] emb|CAB79402.1| hypothetical protein [Ara 2.99878e-43
FL-Next: sp=Thylakoid lumenal 17.9 kDa protein, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
C-terminus
uagpf_v2_unigene3662 uagpf v2.0 1082
AutoFact: chloroplast thylakoid lumen protein [Arabidopsis thaliana] sp|O22773.3|TL16_ARATH RecName: Full=Thylakoid lumenal 16.5 kDa protein, chloroplastic; Flags: Precursor gb|AAK63989.1| AT4g02530/T10P11_17 [Arabidopsis thaliana] gb|AAL87390.1| AT4g02530/T10P11_1 3.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: chloroplast thylakoid lumen protein 0.0
Complete
uagpf_v2_unigene6776 uagpf v2.0 409
AutoFact: D1 protease precursor [Nicotiana plumbaginifolia] 4.0e-18
FL-Next: tr=Putative uncharacterized protein; Oryza sativa subsp. indica (Rice). 0.0
Blast2go: peptidase s41 family protein 4.43897e-21
C-terminus
uagpf_v2_unigene8894 uagpf v2.0 359
AutoFact: PsbP n=1 Tax=Gossypium hirsutum RepID=E5LBM4_GOSHI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: domain-containing protein 1 0.0
Internal
uagpf_v2_unigene9530 uagpf v2.0 399
AutoFact: putative peptidyl-prolycis-trans isomerase protein [Oryza sativa Japonica Group] dbj|BAD30114.1| putative peptidyl-prolycis-trans isomerase protein [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: peptidyl-prolycis-trans isomerase protein 0.0
Internal
uagpf_v2_unigene11745 uagpf v2.0 604
AutoFact: FK506 binding protein, putative n=1 Tax=Ricinus communis RepID=B9R8R8_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: fk506 binding 0.0
C-terminus
uagpf_v2_unigene11806 uagpf v2.0 781
AutoFact: Peptidyl-prolyl cis-trans isomerase B, ppib, putative n=1 Tax=Ricinus communis RepID=B9RE54_RICCO 2.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: peptidyl-prolyl cis-trans isomerase 0.0
C-terminus
uagpf_v2_unigene13516 uagpf v2.0 460
AutoFact: RecName: Full=Peptidyl-prolyl cis-trans isomerase, chloroplastic; AltName: Full=40 kDa thylakoid lumen PPIase; AltName: Full=40 kDa thylakoid lumen rotamase; Flags: Precursor emb|CAA72792.1| thylakoid lumen rotamase [Spinacia oleracea] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: peptidyl-prolyl cis-trans isomerase chloroplastic-like 0.0
N-terminus
uagpf_v2_unigene17397 uagpf v2.0 592
AutoFact: photosystem II stability/assembly factor HCF136 [Arabidopsis thaliana] sp|O82660.1|P2SAF_ARATH RecName: Full=Photosystem II stability/assembly factor HCF136, chloroplastic; Flags: Precursor emb|CAA75723.1| HCF136 protein [Arabidopsis thaliana] dbj|BAB0982 0.0
FL-Next: sp=Photosystem II stability/assembly factor HCF136, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
C-terminus
uagpf_v2_unigene18009 uagpf v2.0 705
AutoFact: Unassigned protein
Blast2go: sdl-1 protein 0.0
Coding
uagpf_v2_unigene25299 uagpf v2.0 401
AutoFact: Pentapeptide repeat-containing protein [Arabidopsis thaliana] sp|Q8H1Q1.1|TL225_ARATH RecName: Full=Thylakoid lumenal protein At1g12250, chloroplastic; Flags: Precursor gb|AAN13098.1| unknown protein [Arabidopsis thaliana] gb|AEE28857.1| Pentapeptide repe 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentapeptide repeat-containing protein 0.0
C-terminus
uagpf_v2_unigene25541 uagpf v2.0 521
AutoFact: Thylakoid lumenal 17.4 kDa protein, chloroplast, putative n=1 Tax=Ricinus communis RepID=B9SJT2_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: thylakoid lumenal protein 0.0
C-terminus
uagpf_v2_unigene25868 uagpf v2.0 297
AutoFact: RecName: Full=Peptidyl-prolyl cis-trans isomerase, chloroplastic; AltName: Full=40 kDa thylakoid lumen PPIase; AltName: Full=40 kDa thylakoid lumen rotamase; Flags: Precursor emb|CAA72792.1| thylakoid lumen rotamase [Spinacia oleracea] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: peptidyl-prolyl cis-trans isomerase chloroplastic-like 0.0
C-terminus
uagpf_v2_unigene25925 uagpf v2.0 623
AutoFact: Electron transporter, putative n=1 Tax=Ricinus communis RepID=B9SPX9_RICCO 0.0
Blast2go: uncharacterized protein 0.0
Putative coding
uagpf_v2_unigene27038 uagpf v2.0 201
AutoFact: Oxygen-evolving enhancer protein 3-1, chloroplastic n=3 Tax=Arabidopsis RepID=PSBQ1_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: oxygen-evolving enhancer protein 3-1 0.0
N-terminus
uagpf_v2_unigene27265 uagpf v2.0 410
AutoFact: PsbP domain containing protein 1.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: psbp domain-containing protein chloroplastic-like 0.0
C-terminus
uagpf_v2_unigene27633 uagpf v2.0 491
AutoFact: FKBP-type peptidyl-prolyl cis-trans isomerase 3 [Arabidopsis thaliana] sp|Q9SCY2.2|FKBP3_ARATH RecName: Full=FKBP-type peptidyl-prolyl cis-trans isomerase 3, chloroplastic; Short=PPIase; AltName: Full=AtFKBP13; AltName: Full=FK506-binding protein 1; AltNa 2.0e-40
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
uagpf_v2_unigene27984 uagpf v2.0 603
AutoFact: Electron transporter, putative n=1 Tax=Ricinus communis RepID=B9SPX9_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: uncharacterized protein 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain