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Assembly Name: uagpf v2.0

Name: chloroplast thylakoid lumen

Term: GO:0009543  Help

Source: GO from Blast2go

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene28382 uagpf v2.0 471
AutoFact: thylakoid lumenal protein [Arabidopsis thaliana] sp|Q9SW33.1|TL1Y_ARATH RecName: Full=Thylakoid lumenal 17.9 kDa protein, chloroplastic; Flags: Precursor emb|CAB36735.1| hypothetical protein [Arabidopsis thaliana] emb|CAB79402.1| hypothetical protein [Ara 0.0
FL-Next: sp=Thylakoid lumenal 17.9 kDa protein, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
N-terminus
uagpf_v2_unigene28544 uagpf v2.0 434
AutoFact: Unassigned protein
FL-Next: tr=N-acetyltransferase, putative; Ricinus communis (Castor bean). 0.0
Blast2go: sdl-1 protein 0.0
Putative N-terminus
uagpf_v2_unigene28970 uagpf v2.0 491
AutoFact: photosystem II stability/assembly factor HCF136 [Arabidopsis thaliana] sp|O82660.1|P2SAF_ARATH RecName: Full=Photosystem II stability/assembly factor HCF136, chloroplastic; Flags: Precursor emb|CAA75723.1| HCF136 protein [Arabidopsis thaliana] dbj|BAB0982 0.0
FL-Next: sp=Photosystem II stability/assembly factor HCF136, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
Internal
uagpf_v2_unigene29001 uagpf v2.0 191
AutoFact: PsbP domain-containing protein 4 [Arabidopsis thaliana] sp|O49292.2|PPD4_ARATH RecName: Full=PsbP domain-containing protein 4, chloroplastic; AltName: Full=OEC23-like protein 5; Flags: Precursor gb|AEE35933.1| PsbP domain-containing protein 4 [Arabidopsis 0.0
Blast2go: psbp domain-containing protein chloroplastic-like 0.0
unknown
uagpf_v2_unigene29629 uagpf v2.0 388
AutoFact: photosystem I reaction center subunit III [Vigna radiata] 0.0
Blast2go: protein 0.0
unknown
uagpf_v2_unigene29744 uagpf v2.0 532
AutoFact: Plastocyanin, chloroplastic n=1 Tax=Spinacia oleracea RepID=PLAS_SPIOL 1.4013e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: plastocyanin chloroplast 0.0
N-terminus
uagpf_v2_unigene29817 uagpf v2.0 455
AutoFact: D1 protease-like protein precursor [Triticum aestivum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: carboxyl-terminal-processing protease 0.0
Internal
uagpf_v2_unigene29867 uagpf v2.0 477
AutoFact: putative FKBP type peptidyl-prolyl cis-trans isomerase [Pyrus communis] gb|AAL66198.1|AF386516_1 putative FKBP type peptidyl-prolyl cis-trans isomerase [Pyrus communis] 0.0
FL-Next: sp=Probable FKBP-type peptidyl-prolyl cis-trans isomerase 2, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: probable fkbp-type peptidyl-prolyl cis-trans isomerase chloroplastic-like 0.0
N-terminus
uagpf_v2_unigene30126 uagpf v2.0 384
AutoFact: Protease degQ, putative n=1 Tax=Ricinus communis RepID=B9SF71_RICCO 0.0
FL-Next: sp=Protease Do-like 1, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: serine-type peptidase 0.0
C-terminus
uagpf_v2_unigene31303 uagpf v2.0 344
AutoFact: peptidylprolyl cis-trans isomerase [Oryza sativa Indica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: peptidylprolyl cis-trans isomerase 0.0
Putative C-terminus
uagpf_v2_unigene34006 uagpf v2.0 355
AutoFact: Thylakoid lumenal 29.8 kDa protein, chloroplast, putative n=1 Tax=Ricinus communis RepID=B9SJN0_RICCO 0.0
Blast2go: protein 0.0
unknown
uagpf_v2_unigene37895 uagpf v2.0 415
AutoFact: immunophilin/FKBP-type peptidyl-prolyl cis-trans isomerase-like protein [Oryza sativa Japonica Group] dbj|BAD30608.1| immunophilin/FKBP-type peptidyl-prolyl cis-trans isomerase-like protein [Oryza sativa Japonica Group] gb|EAZ02679.1| hypothetical protein 0.0
FL-Next: sp=Probable FKBP-type peptidyl-prolyl cis-trans isomerase 7, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
C-terminus
uagpf_v2_unigene38328 uagpf v2.0 496
AutoFact: D1 protease-like protein precursor [Triticum aestivum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: carboxyl-terminal-processing protease 0.0
C-terminus
uagpf_v2_unigene39521 uagpf v2.0 441
AutoFact: Protease Do-like 1, chloroplastic n=2 Tax=Arabidopsis RepID=DEGP1_ARATH 0.0
Blast2go: serine-type peptidase 0.0
unknown
uagpf_v2_unigene40459 uagpf v2.0 249
AutoFact: violaxanthin de-epoxidase [Zingiber officinale] 0.0
Blast2go: violaxanthin de-epoxidase 0.0
unknown
uagpf_v2_unigene41235 uagpf v2.0 411
AutoFact: FKBP-like peptidyl-prolyl cis-trans isomerase-like protein [Arabidopsis thaliana] gb|AAF04431.1|AC010927_24 unknown protein [Arabidopsis thaliana] gb|AAM19814.1| AT3g10060/T22K18_11 [Arabidopsis thaliana] gb|AAM67428.1| AT3g10060/T22K18_11 [Arabidopsis th 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: fk506-binding protein 0.0
C-terminus
uagpf_v2_unigene43270 uagpf v2.0 323
AutoFact: Thylakoid lumenal 16.5 kDa protein, chloroplastic n=2 Tax=Arabidopsis RepID=TL16_ARATH 1.0e-05
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: chloroplast thylakoid lumen protein 1.36348e-15
C-terminus
uagpf_v2_unigene44278 uagpf v2.0 273
AutoFact: protease Do-like 8 [Arabidopsis thaliana] sp|Q9LU10.1|DEGP8_ARATH RecName: Full=Protease Do-like 8, chloroplastic; Flags: Precursor dbj|BAA98101.1| unnamed protein product [Arabidopsis thaliana] gb|AAL08237.1| AT5g39830/K13H13_10 [Arabidopsis thaliana] gb 0.0
Blast2go: protease do-like 8 0.0
unknown
uagpf_v2_unigene44875 uagpf v2.0 360
AutoFact: Unassigned protein
FL-Next: tr=SDL-1 protein; Nicotiana plumbaginifolia (Leadwort-leaved tobacco) (Tex-Mex tobacco). 0.0
Blast2go: sdl-1 protein 0.0
Internal
uagpf_v2_unigene44994 uagpf v2.0 359
AutoFact: Thylakoid lumenal 29.8 kDa protein, chloroplast, putative n=1 Tax=Ricinus communis RepID=B9SJN0_RICCO 0.0
FL-Next: sp=PsbP domain-containing protein 6, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain