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Assembly Name: uagpf v2.0

Name: response to cold

Term: GO:0009409  Help

Source: GO from Blast2go

Ontology: Biological Process

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
uagpf_v2_unigene31628 uagpf v2.0 1071
• AutoFact: putative pre-mRNA splicing factor [Oryza sativa Japonica Group] gb|AAP54456.1| U5 snRNP-associated 102 kDa protein, putative, expressed [Oryza sativa Japonica Group] gb|EAY79087.1| hypothetical protein OsI_34194 [Oryza sativa Indica Group] 0.0
• FL-Next: tr=Pre-mRNA splicing factor, putative; Ricinus communis (Castor bean). 0.0
• Blast2go: pre-mrna splicing factor 0.0
Internal
uagpf_v2_unigene31954 uagpf v2.0 762
• AutoFact: calcium-dependent lipid-binding domain-containing protein [Arabidopsis thaliana] gb|AAL06551.1|AF412098_1 AT4g34150/F28A23_90 [Arabidopsis thaliana] gb|AAN31905.1| unknown protein [Arabidopsis thaliana] gb|AAT41866.1| At4g34150 [Arabidopsis thaliana] gb|A 1.4013e-45
• Blast2go: protein binding 0.0
Coding
uagpf_v2_unigene32129 uagpf v2.0 419
• AutoFact: Polcalcin Jun o, putative n=1 Tax=Ricinus communis RepID=B9SJ25_RICCO 2.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: calcium-binding pollen allergen 2.10195e-44
C-terminus
uagpf_v2_unigene32225 uagpf v2.0 352
• AutoFact: LRR receptor-like serine/threonine-protein kinase RPK2 [Arabidopsis thaliana] sp|Q9S7I6.1|RPK2_ARATH RecName: Full=LRR receptor-like serine/threonine-protein kinase RPK2; AltName: Full=Protein TOADSTOOL 2; AltName: Full=Receptor-like protein kinase 2; Fla 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: lrr receptor-like serine threonine-protein kinase rpk2 0.0
C-terminus
uagpf_v2_unigene32835 uagpf v2.0 197
• AutoFact: Hexokinase 6 n=1 Tax=Nicotiana tabacum RepID=Q6Q8A0_TOBAC 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: hexokinase 0.0
Internal
uagpf_v2_unigene32855 uagpf v2.0 327
• AutoFact: 3-ketoacyl-CoA synthase n=1 Tax=Picea sitchensis RepID=D5A9Z6_PICSI 0.0
• FL-Next: sp=3-ketoacyl-CoA synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: 3-ketoacyl- synthase 0.0
C-terminus
uagpf_v2_unigene33479 uagpf v2.0 366
• AutoFact: zinc ion binding protein [Arabidopsis thaliana] gb|AAK95259.1|AF410273_1 AT3g54360/T12E18_50 [Arabidopsis thaliana] emb|CAB81801.1| RING finger-like protein [Arabidopsis thaliana] gb|AAM63273.1| RING finger-like protein [Arabidopsis thaliana] gb|AAN18187. 0.0
• Blast2go: binding protein 0.0
unknown
uagpf_v2_unigene34097 uagpf v2.0 447
• AutoFact: Ribosomal RNA adenine dimethylase family protein [Arabidopsis thaliana] gb|AAC09322.1| dimethyladenosine transferase [Arabidopsis thaliana] dbj|BAC42078.1| putative dimethyladenosine transferase [Arabidopsis thaliana] gb|AAO50630.1| putative dimethyladeno 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: dimethyladenosine transferase 0.0
C-terminus
uagpf_v2_unigene34264 uagpf v2.0 352
• AutoFact: DEAD-box ATP-dependent RNA helicase 26 [Arabidopsis thaliana] sp|Q9FNM7.2|RH26_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 26 gb|AED91329.1| DEAD-box ATP-dependent RNA helicase 26 [Arabidopsis thaliana] 0.0
• Blast2go: rna helicase 0.0
Coding
uagpf_v2_unigene34680 uagpf v2.0 93
• AutoFact: Serine/threonine-specific protein kinase, putative n=1 Tax=Ricinus communis RepID=B9S9Z6_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: probable leucine-rich repeat receptor-like serine threonine-protein kinase at5g15730-like 0.0
Putative N-terminus
uagpf_v2_unigene34833 uagpf v2.0 390
• AutoFact: 3-ketoacyl-CoA synthase n=1 Tax=Sorghum bicolor RepID=C5YW23_SORBI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: 3-ketoacyl- synthase 0.0
C-terminus
uagpf_v2_unigene34838 uagpf v2.0 280
• AutoFact: Carbon catabolite repressor protein, putative n=1 Tax=Ricinus communis RepID=B9RMY1_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: uncharacterized calcium-binding protein at1g02270-like 0.0
Putative C-terminus
uagpf_v2_unigene35310 uagpf v2.0 181
• AutoFact: Cellulose synthase-like D3, glycosyltransferase family 2 protein n=4 Tax=Physcomitrella patens RepID=A9SS17_PHYPA 0.0
• Blast2go: cellulose synthase-like glycosyltransferase family 2 protein 0.0
unknown
uagpf_v2_unigene35472 uagpf v2.0 400
• AutoFact: ATP synthase delta chain, chloroplastic n=1 Tax=Spinacia oleracea RepID=ATPD_SPIOL 1.96182e-44
• Blast2go: protein 0.0
unknown
uagpf_v2_unigene35588 uagpf v2.0 124
• AutoFact: MIP-T3 multi-domain protein 8.0e-16
• FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
• Blast2go: f-box-like wd repeat-containing protein tbl1xr1-like 0.0
Internal
uagpf_v2_unigene36060 uagpf v2.0 1982
• AutoFact: Elongation factor 2 n=32 Tax=Magnoliophyta RepID=EF2_BETVU 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: elongation factor ef-2 0.0
Internal
uagpf_v2_unigene36066 uagpf v2.0 568
• AutoFact: Hexokinase 6 n=1 Tax=Nicotiana tabacum RepID=Q6Q8A0_TOBAC 0.0
• Blast2go: hexokinase 0.0
unknown
uagpf_v2_unigene36090 uagpf v2.0 496
• AutoFact: Putative glycine-rich protein n=1 Tax=Picea glauca RepID=Q3HRT2_PICGL 2.0e-40
• Blast2go: protein 0.0
unknown
uagpf_v2_unigene36155 uagpf v2.0 669
• AutoFact: RNA recognition motif-containing protein [Arabidopsis thaliana] ref|NP_849832.1| RNA recognition motif-containing protein [Arabidopsis thaliana] gb|AAB71977.1| putative RNA-binding protein [Arabidopsis thaliana] gb|AAM65738.1| RNA binding protein, putativ 4.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: rna recognition motif-containing protein 2.8026e-45
N-terminus
uagpf_v2_unigene37314 uagpf v2.0 326
• AutoFact: 30S ribosomal protein S5, putative n=1 Tax=Ricinus communis RepID=B9RBC3_RICCO 1.96182e-44
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: 30s ribosomal protein s5 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain