Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: uagpf v2.0

Name: cytoplasm

Term: GO:0005737  Help

Source: GO from Blast2go

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene4452 uagpf v2.0 596
AutoFact: transcription initiation factor IIB-2 [Arabidopsis thaliana] sp|Q9SS44.1|TF2B2_ARATH RecName: Full=Transcription initiation factor IIB-2; AltName: Full=General transcription factor TFIIB-2; Short=AtTFIIB2 gb|AAF02810.1|AC009400_6 transcription initiation 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transcription initiation factor iib 0.0
C-terminus
uagpf_v2_unigene4507 uagpf v2.0 703
AutoFact: Delta 1-pyrroline-5-carboxylate synthetase, putative n=2 Tax=Euphorbiaceae RepID=B9SE11_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pyrroline-5-carboxylate synthetase 0.0
Internal
uagpf_v2_unigene4609 uagpf v2.0 755
AutoFact: contains similarity to regulatory protein RecX [Arabidopsis thaliana] 5.0e-34
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: regulatory protein recx-like 5.04467e-44
C-terminus
uagpf_v2_unigene4710 uagpf v2.0 1003
AutoFact: FVE n=2 Tax=Papilionoideae RepID=Q52ZH8_PEA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nucleosome chromatin assembly factor group 0.0
C-terminus
uagpf_v2_unigene4745 uagpf v2.0 471
AutoFact: Tubulin beta-4 chain n=11 Tax=Eukaryota RepID=TBB4_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: tubulin beta 0.0
Internal
uagpf_v2_unigene4912 uagpf v2.0 1622
AutoFact: casein kinase 2, beta polypeptide [Arabidopsis thaliana] sp|O80507.1|CSK2E_ARATH RecName: Full=Putative casein kinase II subunit beta-4; Short=CK II beta-4 gb|AAC27470.1| putative casein kinase II beta subunit [Arabidopsis thaliana] gb|AAM65621.1| putativ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: casein kinase beta polypeptide 0.0
Complete
uagpf_v2_unigene4995 uagpf v2.0 620
AutoFact: Armadillo/beta-catenin-like repeat family protein n=3 Tax=Zea mays RepID=B6TK50_MAIZE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: hsp70-binding protein 1-like 0.0
C-terminus
uagpf_v2_unigene5015 uagpf v2.0 510
AutoFact: Cyclin-like F-box [Medicago truncatula] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: f-box family protein 0.0
N-terminus
uagpf_v2_unigene5139 uagpf v2.0 930
AutoFact: histone deacetylase 5 [Arabidopsis thaliana] sp|Q8RX28.1|HDA5_ARATH RecName: Full=Histone deacetylase 5 gb|AAM13986.1| putative histone deacetylase [Arabidopsis thaliana] gb|AAM53342.1| histone deacetylase-like protein [Arabidopsis thaliana] gb|AAN15392.1 6.0e-32
FL-Next: sp=Histone deacetylase 5; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: histone deacetylase 2.68041e-37
C-terminus
uagpf_v2_unigene5173 uagpf v2.0 1193
AutoFact: PREDICTED: phenylalanyl-tRNA synthetase beta chain [Monodelphis domestica] 0.0
FL-Next: sp=Probable phenylalanyl-tRNA synthetase beta chain; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
Internal
uagpf_v2_unigene5219 uagpf v2.0 653
AutoFact: Protein C9orf74, putative n=1 Tax=Ricinus communis RepID=B9RDI8_RICCO 5.0e-32
FL-Next: sp=Ubiquitin-related modifier 1 homolog; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: protein 0.0
Complete
uagpf_v2_unigene5260 uagpf v2.0 1163
AutoFact: RuBisCO large subunit-binding protein subunit alpha, chloroplastic n=9 Tax=fabids RepID=RUBA_PEA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rubisco subunit binding-protein alpha subunit 0.0
N-terminus
uagpf_v2_unigene5452 uagpf v2.0 736
AutoFact: Serine/threonine protein kinase, putative n=1 Tax=Ricinus communis RepID=B9SWQ3_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein kinase g11a-like 0.0
C-terminus
uagpf_v2_unigene5458 uagpf v2.0 606
AutoFact: Polcalcin Jun o, putative n=1 Tax=Ricinus communis RepID=B9SJ25_RICCO 2.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: calcium-binding pollen allergen 2.10195e-44
C-terminus
uagpf_v2_unigene5472 uagpf v2.0 533
AutoFact: transcription initiation factor IIB-2 [Arabidopsis thaliana] sp|Q9SS44.1|TF2B2_ARATH RecName: Full=Transcription initiation factor IIB-2; AltName: Full=General transcription factor TFIIB-2; Short=AtTFIIB2 gb|AAF02810.1|AC009400_6 transcription initiation 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transcription initiation factor iib 0.0
N-terminus
uagpf_v2_unigene5542 uagpf v2.0 428
AutoFact: Methionine aminopeptidase n=1 Tax=Picea sitchensis RepID=D5ABX5_PICSI 0.0
FL-Next: sp=Methionine aminopeptidase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: methionine aminopeptidase 2b 0.0
N-terminus
uagpf_v2_unigene5599 uagpf v2.0 595
AutoFact: RecName: Full=Endoplasmin homolog; AltName: Full=Glucose-regulated protein 94 homolog; Short=GRP-94 homolog; Flags: Precursor gb|AAA16785.1| heat shock protein 90 [Catharanthus roseus] 0.0
Blast2go: heat shock protein 90 0.0
unknown
uagpf_v2_unigene5744 uagpf v2.0 509
AutoFact: cyclin H-1 [Oryza sativa Japonica Group] 0.0
Blast2go: cyclin h-1 0.0
unknown
uagpf_v2_unigene5786 uagpf v2.0 388
AutoFact: Protein kinase [Medicago truncatula] 0.0
Blast2go: protein kinase 0.0
Putative coding
uagpf_v2_unigene5827 uagpf v2.0 780
AutoFact: Chaperonin protein n=6 Tax=Poaceae RepID=Q6ASR1_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: t-complex protein 1 subunit zeta 0.0
Complete

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain