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Assembly Name: uagpf v2.0

Name: cytoplasm

Term: GO:0005737  Help

Source: GO from Blast2go

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene43593 uagpf v2.0 326
AutoFact: contains similarity to regulatory protein RecX [Arabidopsis thaliana] 5.0e-34
Blast2go: regulatory protein recx-like 5.04467e-44
unknown
uagpf_v2_unigene43831 uagpf v2.0 290
AutoFact: armadillo/beta-catenin-like repeat-containing protein [Arabidopsis thaliana] gb|AAL32805.1| putative protein [Arabidopsis thaliana] gb|AAR23706.1| At4g27640 [Arabidopsis thaliana] gb|AEE85373.1| armadillo/beta-catenin-like repeat-containing protein [Arabi 0.0
FL-Next: tr=HEAT repeat family protein, expressed; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: probable importin subunit beta-4-like 0.0
Internal
uagpf_v2_unigene44163 uagpf v2.0 274
AutoFact: Histidine kinase 1 plant, putative n=1 Tax=Ricinus communis RepID=B9RNF2_RICCO 3.00004e-41
FL-Next: sp=Histidine kinase CKI1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: histidine kinase 1 0.0
Internal
uagpf_v2_unigene44629 uagpf v2.0 246
AutoFact: protein FIZZY-related 1 [Arabidopsis thaliana] sp|Q8VZS9.1|FZR1_ARATH RecName: Full=Protein FIZZY-RELATED 1; AltName: Full=Cell cycle switch protein CCS52A2 gb|AAL36231.1| putative Srw1 protein [Arabidopsis thaliana] gb|AAM14174.1| putative Srw1 protein [ 3.0e-12
Blast2go: protein 2.12006e-20
unknown
uagpf_v2_unigene44897 uagpf v2.0 216
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_77.assembly12x (Fragment) n=3 Tax=core eudicotyledons RepID=D7SY66_VITVI 0.0
Blast2go: protein 0.0
unknown
uagpf_v2_unigene45259 uagpf v2.0 251
AutoFact: Unassigned protein
Blast2go: aspartate glutamate uridylate kinase-like protein 0.0
Coding
uagpf_v2_unigene45310 uagpf v2.0 351
AutoFact: DEAD-box ATP-dependent RNA helicase 38 [Arabidopsis thaliana] sp|Q93ZG7.2|RH38_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 38; AltName: Full=Low expression of osmotically-responsive genes 4 protein; AltName: Full=Protein CRYOPHYTE emb|CAB64214 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dead-box atp-dependent rna helicase 38-like 0.0
N-terminus
uagpf_v2_unigene45419 uagpf v2.0 413
AutoFact: Ccaat-binding transcription factor, putative n=1 Tax=Ricinus communis RepID=B9RHZ1_RICCO 2.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nuclear transcription factor y subunit c-2 3.49541e-11
Internal
uagpf_v2_unigene45587 uagpf v2.0 317
AutoFact: RHO guanyl-nucleotide exchange factor 11 [Arabidopsis thaliana] gb|AAF29412.1|AC022354_11 dynein light chain, putative [Arabidopsis thaliana] gb|AAG51538.1|AC037424_3 unknown protein; 73838-74229 [Arabidopsis thaliana] gb|AAR20740.1| At1g52250 [Arabidopsi 2.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cytoplasmic dynein light 0.0
N-terminus
uagpf_v2_unigene45769 uagpf v2.0 163
AutoFact: kinesin 5 [Arabidopsis thaliana] gb|AEE82489.1| kinesin 5 [Arabidopsis thaliana] 0.0
FL-Next: sp=Kinesin-3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: kinesin-like protein 0.0
Internal
uagpf_v2_unigene45856 uagpf v2.0 411
AutoFact: [L] COG1241 Predicted ATPase involved in replication control, Cdc46/Mcm family 1.0e-37
Blast2go: at2g07360-like protein 0.0
unknown
uagpf_v2_unigene45922 uagpf v2.0 150
AutoFact: DNA-damage-repair/toleration protein DRT102, putative n=1 Tax=Ricinus communis RepID=B9RES2_RICCO 0.0
Blast2go: dna-damage-repair toleration protein drt102 0.0
unknown
uagpf_v2_unigene45947 uagpf v2.0 328
AutoFact: Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Selaginella moellendorffii RepID=D8SWI5_SELML 3.0e-19
FL-Next: sp=Ubiquitin carboxyl-terminal hydrolase; Selaginella moellendorffii (Spikemoss). 0.0
Blast2go: ubiquitin specific peptidase y chromosome 3.45375e-22
Internal
uagpf_v2_unigene46093 uagpf v2.0 342
AutoFact: Uridine kinase-like protein 1, chloroplastic n=4 Tax=Arabidopsis RepID=UKL1_ARATH 8.0e-13
FL-Next: sp=Uridine kinase-like protein 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: uracil phosphoribosyltransferase 9.76563e-17
N-terminus
uagpf_v2_unigene46193 uagpf v2.0 258
AutoFact: FVE n=2 Tax=Papilionoideae RepID=Q52ZH8_PEA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nucleosome chromatin assembly factor group 0.0
N-terminus
uagpf_v2_unigene46440 uagpf v2.0 411
AutoFact: Nuclear transcription factor Y subunit C-2 n=2 Tax=Arabidopsis RepID=NFYC2_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nuclear transcription factor y subunit c-2 0.0
N-terminus
uagpf_v2_unigene46550 uagpf v2.0 516
AutoFact: Calcium dependent protein kinase 14 n=2 Tax=Populus trichocarpa RepID=B9GEZ7_POPTR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: calcium-dependent protein 0.0
Internal
uagpf_v2_unigene46677 uagpf v2.0 223
AutoFact: Translational repressor Pumilio/PUF3 and related RNA-binding proteins (Puf superfamily) (ISS) [Ostreococcus tauri] emb|CAL57619.1| Translational repressor Pumilio/PUF3 and related RNA-binding proteins (Puf superfamily) (ISS) [Ostreococcus tauri] 1.99965e-42
FL-Next: sp=Pumilio homolog 12; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
Internal
uagpf_v2_unigene47049 uagpf v2.0 350
AutoFact: Small RNA 2'-O-methyltransferase n=3 Tax=Camelineae RepID=HEN1_ARATH 7.0e-07
FL-Next: sp=Small RNA 2'-O-methyltransferase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: rna methylase hua enhancer 1 3.64119e-09
N-terminus
uagpf_v2_unigene47102 uagpf v2.0 423
AutoFact: Putative spermine synthase (Fragment) n=2 Tax=Cupressaceae RepID=Q76JP8_CRYJA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: spermine synthase 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain