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Assembly Name: uagpf v2.0

Name: cytoplasm

Term: GO:0005737  Help

Source: GO from Blast2go

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene36706 uagpf v2.0 377
AutoFact: ubiquitin-protein ligase UBR7 [Arabidopsis thaliana] ref|NP_974600.1| ubiquitin-protein ligase UBR7 [Arabidopsis thaliana] ref|NP_001078436.1| ubiquitin-protein ligase UBR7 [Arabidopsis thaliana] dbj|BAH30533.1| hypothetical protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: ubiquitin-protein ligase ubr7 0.0
Internal
uagpf_v2_unigene36810 uagpf v2.0 478
AutoFact: Calmodulin, putative n=1 Tax=Ricinus communis RepID=B9SME7_RICCO 1.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: calcium-binding protein 0.0
Putative N-terminus
uagpf_v2_unigene36828 uagpf v2.0 458
AutoFact: dsRNA-binding protein 5 [Arabidopsis thaliana] sp|Q8GY79.1|DRB5_ARATH RecName: Full=Double-stranded RNA-binding protein 5; AltName: Full=dsRNA-binding protein 5; Short=AtDRB5 dbj|BAC42450.1| unknown protein [Arabidopsis thaliana] gb|AAP75803.1| At5g41070 7.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: double-stranded rna-binding protein 2-like 8.05487e-35
N-terminus
uagpf_v2_unigene36965 uagpf v2.0 481
AutoFact: RNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9S3Y1_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna binding 0.0
N-terminus
uagpf_v2_unigene37009 uagpf v2.0 297
AutoFact: Chaperonin protein n=6 Tax=Poaceae RepID=Q6ASR1_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: t-complex protein 1 subunit zeta 0.0
N-terminus
uagpf_v2_unigene37169 uagpf v2.0 459
AutoFact: PREDICTED: similar to pentatricopeptide (PPR) repeat-containing protein n=1 Tax=Vitis vinifera RepID=UPI0001984DF5 0.0
FL-Next: sp=Conserved oligomeric Golgi complex subunit 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: uncharacterized protein 0.0
C-terminus
uagpf_v2_unigene37449 uagpf v2.0 423
AutoFact: Delta 1-pyrroline-5-carboxylate synthetase, putative n=2 Tax=Euphorbiaceae RepID=B9SE11_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pyrroline-5-carboxylate synthetase 0.0
N-terminus
uagpf_v2_unigene37493 uagpf v2.0 510
AutoFact: DEAD-box ATP-dependent RNA helicase 21 [Arabidopsis thaliana] sp|P93008.1|RH21_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 21 gb|AAC69128.1| putative U5 small nuclear ribonucleoprotein, an RNA helicase [Arabidopsis thaliana] gb|AAL38370.1| put 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dead-box atp-dependent rna helicase 0.0
N-terminus
uagpf_v2_unigene37513 uagpf v2.0 557
AutoFact: replication licensing factor MCM7 homologue [Zea mays] emb|CAC44902.1| replication licensing factor MCM7 homologue [Zea mays] 0.0
FL-Next: sp=Protein PROLIFERA; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein prolifera 0.0
Internal
uagpf_v2_unigene37549 uagpf v2.0 481
AutoFact: Nicotinate phosphoribosyltransferase, putative n=1 Tax=Ricinus communis RepID=B9SC93_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nicotinate phosphoribosyltransferase-like 0.0
Internal
uagpf_v2_unigene37556 uagpf v2.0 419
AutoFact: Cyclin-like F-box [Medicago truncatula] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: f-box family protein 0.0
Internal
uagpf_v2_unigene37658 uagpf v2.0 486
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] gb|AAF79432.1|AC025808_14 F18O14.27 [Arabidopsis thaliana] gb|AEE29863.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana] 0.0
FL-Next: sp=Protein NUCLEAR FUSION DEFECTIVE 5, mitochondrial; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: pentatricopeptide repeat-containing protein 0.0
Putative C-terminus
uagpf_v2_unigene37688 uagpf v2.0 536
AutoFact: DNA repair and transcription factor XPB1 (ISS) [Ostreococcus tauri] emb|CAL53063.1| DNA repair and transcription factor XPB1 (ISS) [Ostreococcus tauri] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
uagpf_v2_unigene37749 uagpf v2.0 484
AutoFact: leucyl-tRNA synthetase [Arabidopsis thaliana] gb|AEE28469.1| leucyl-tRNA synthetase [Arabidopsis thaliana] 0.0
FL-Next: tr=Predicted protein; Hordeum vulgare var. distichum (Two-rowed barley). 0.0
Blast2go: protein 0.0
Internal
uagpf_v2_unigene37751 uagpf v2.0 452
AutoFact: RecName: Full=Importin subunit alpha; AltName: Full=Karyopherin subunit alpha; Short=KAP alpha gb|AAC23722.1| importin alpha [Solanum lycopersicum] 0.0
FL-Next: sp=Importin subunit alpha-1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
Internal
uagpf_v2_unigene38159 uagpf v2.0 291
AutoFact: Serine/threonine protein kinase, putative n=1 Tax=Ricinus communis RepID=B9SWQ3_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein kinase g11a-like 0.0
Internal
uagpf_v2_unigene38165 uagpf v2.0 538
AutoFact: RNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9SBN7_RICCO 0.0
FL-Next: sp=Pumilio homolog 12; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
Internal
uagpf_v2_unigene38268 uagpf v2.0 410
AutoFact: FVE n=2 Tax=Papilionoideae RepID=Q52ZH8_PEA 0.0
FL-Next: sp=WD-40 repeat-containing protein MSI4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: nucleosome chromatin assembly factor group 0.0
Putative N-terminus
uagpf_v2_unigene38496 uagpf v2.0 313
AutoFact: DNA-damage-repair/toleration protein DRT102, putative n=1 Tax=Ricinus communis RepID=B9RES2_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna-damage-repair toleration protein drt102 0.0
Internal
uagpf_v2_unigene38528 uagpf v2.0 508
AutoFact: Peptidyl-prolyl cis-trans isomerase d, ppid, putative n=1 Tax=Ricinus communis RepID=B9S777_RICCO 0.0
FL-Next: sp=Peptidyl-prolyl cis-trans isomerase; Pinus halepensis (Aleppo pine). 0.0
Blast2go: peptidyl-prolyl cis-trans isomerase cyp40 0.0
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain