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Assembly Name: uagpf v2.0

Name: DNA repair

Term: GO:0006281  Help

Source: GO from Blast2go

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene11666 uagpf v2.0 727
AutoFact: replication protein A1 [Oryza sativa Indica Group] gb|EAY89034.1| hypothetical protein OsI_10518 [Oryza sativa Indica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: replication protein a 70 kda dna-binding subunit-like 0.0
N-terminus
uagpf_v2_unigene11763 uagpf v2.0 499
AutoFact: HhH-GPD family protein [Anaeromyxobacter sp. Fw109-5] gb|ABS24995.1| HhH-GPD family protein [Anaeromyxobacter sp. Fw109-5] 4.0e-08
FL-Next: tr=Putative uncharacterized protein; Ricinus communis (Castor bean). 0.0
Blast2go: gpd family protein 0.0
C-terminus
uagpf_v2_unigene12362 uagpf v2.0 629
AutoFact: [F] COG0756 dUTPase 5.00264e-43
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: deoxyuridine 5 -triphosphate nucleotidohydrolase-like 0.0
N-terminus
uagpf_v2_unigene12848 uagpf v2.0 619
AutoFact: Nucleosome assembly protein family n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TVZ4_PHYPA 0.0
FL-Next: tr=Nucleosome assembly protein family; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: nucleosome assembly protein 1 2 0.0
N-terminus
uagpf_v2_unigene13937 uagpf v2.0 747
AutoFact: DNA binding protein [Arabidopsis thaliana] gb|AAG51077.1|AC069472_17 unknown protein; 19524-20560 [Arabidopsis thaliana] gb|AAM64678.1| unknown [Arabidopsis thaliana] gb|AEE75167.1| DNA binding protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna binding protein 0.0
Complete
uagpf_v2_unigene14705 uagpf v2.0 619
AutoFact: DNA-damage-repair/toleration protein DRT111 [Arabidopsis thaliana] sp|P42698.2|DR111_ARATH RecName: Full=DNA-damage-repair/toleration protein DRT111, chloroplastic; Flags: Precursor gb|AAF19751.1|AC009917_10 Strong similarity to gi|1169200 DNA-Damage-Repa 0.0
FL-Next: sp=DNA-damage-repair/toleration protein DRT111, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna-damage-repair toleration protein drt111 0.0
C-terminus
uagpf_v2_unigene14899 uagpf v2.0 856
AutoFact: Caltractin n=1 Tax=Atriplex nummularia RepID=CATR_ATRNU 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: caltractin 0.0
Complete
uagpf_v2_unigene14931 uagpf v2.0 477
AutoFact: CPD photolyase n=1 Tax=Cucumis sativus RepID=Q9AVI6_CUCSA 0.0
FL-Next: sp=Deoxyribodipyrimidine photo-lyase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: cpd photolyase 0.0
C-terminus
uagpf_v2_unigene14967 uagpf v2.0 381
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
N-terminus
uagpf_v2_unigene15835 uagpf v2.0 754
AutoFact: [F] COG0756 dUTPase 5.00264e-43
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: deoxyuridine 5 -triphosphate nucleotidohydrolase-like 0.0
C-terminus
uagpf_v2_unigene16196 uagpf v2.0 635
AutoFact: transcription initiation factor TFIIH subunit H3 [Arabidopsis thaliana] gb|AAM61618.1| unknown [Arabidopsis thaliana] gb|ABE77412.1| At1g18340 [Arabidopsis thaliana] gb|AEE29705.1| transcription initiation factor TFIIH subunit H3 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
uagpf_v2_unigene16349 uagpf v2.0 974
AutoFact: RecName: Full=FACT complex subunit SSRP1; AltName: Full=Facilitates chromatin transcription complex subunit SSRP1; AltName: Full=Recombination signal sequence recognition protein 1 emb|CAA66480.1| transcription factor [Vicia faba var. minor] 0.0
FL-Next: sp=FACT complex subunit SSRP1; Vicia faba (Broad bean) (Faba vulgaris). 0.0
Blast2go: fact complex subunit ssrp1 0.0
Putative N-terminus
uagpf_v2_unigene17800 uagpf v2.0 1162
AutoFact: DNA repair protein recA-like 3 [Arabidopsis thaliana] sp|Q9ZUP2.2|RECA3_ARATH RecName: Full=DNA repair protein recA homolog 3, mitochondrial; AltName: Full=Recombinase A homolog 3; Flags: Precursor gb|ABM06015.1| At2g19490 [Arabidopsis thaliana] gb|AEC068 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna repair protein reca homolog mitochondrial-like 0.0
C-terminus
uagpf_v2_unigene19962 uagpf v2.0 621
AutoFact: BRCA1/BRCA2-containing complex subunit 3 [Arabidopsis thaliana] gb|AEE74463.1| BRCA1/BRCA2-containing complex subunit 3 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: brca1 brca2-containing complex subunit 3 0.0
C-terminus
uagpf_v2_unigene24995 uagpf v2.0 584
AutoFact: Iron-sulfur cluster assembly protein n=1 Tax=Chlamydomonas reinhardtii RepID=A8IR30_CHLRE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: at4g01940 t7b11_20 0.0
C-terminus
uagpf_v2_unigene25677 uagpf v2.0 338
AutoFact: FACT complex subunit n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TYN6_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: fact complex subunit 0.0
C-terminus
uagpf_v2_unigene25881 uagpf v2.0 634
AutoFact: endonuclease/exonuclease/phosphatase domain-containing protein [Arabidopsis thaliana] gb|AAU94372.1| At3g48425 [Arabidopsis thaliana] gb|AAV59281.1| At3g48425 [Arabidopsis thaliana] gb|AEE78415.1| endonuclease/exonuclease/phosphatase domain-containing pro 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna-(apurinic or apyrimidinic site) lyase 0.0
C-terminus
uagpf_v2_unigene25928 uagpf v2.0 492
AutoFact: cryptochrome 1 [Solanum lycopersicum] gb|AAF72555.1|AF130424_1 cryptochrome 1 [Solanum lycopersicum] 0.0
Blast2go: cryptochrome 1 0.0
unknown
uagpf_v2_unigene26469 uagpf v2.0 410
AutoFact: RecName: Full=Deoxyuridine 5'-triphosphate nucleotidohydrolase; Short=dUTPase; AltName: Full=P18; AltName: Full=dUTP pyrophosphatase gb|AAB22611.1| deoxyuridine triphosphatase [Solanum lycopersicum] 0.0
Blast2go: deoxyuridine 5 -triphosphate nucleotidohydrolase-like 0.0
unknown
uagpf_v2_unigene26889 uagpf v2.0 448
AutoFact: putative formamidopyrimidine-DNA glycosylase 1 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: formamidopyrimidine-dna glycosylase 0.0
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain