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Assembly Name: uagpf v2.0

Name: response to DNA damage stimulus

Term: GO:0006974  Help

Source: GO from Blast2go

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene3171 uagpf v2.0 511
AutoFact: putative RecA protein [Oryza sativa Japonica Group] 8.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna repair protein reca homolog mitochondrial-like 1.03698e-27
Complete
uagpf_v2_unigene9425 uagpf v2.0 867
AutoFact: putative mitotic arrest defective protein 2B [Oryza sativa Japonica Group] gb|EEE55135.1| hypothetical protein OsJ_02922 [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: mitotic spindle assembly checkpoint protein mad2b 0.0
Complete
uagpf_v2_unigene25024 uagpf v2.0 660
AutoFact: Replication factor C large subunit (Fragment) n=2 Tax=Poaceae RepID=Q8L6A5_9POAL 0.0
Blast2go: replication factor c subunit 1-like 0.0
unknown
uagpf_v2_unigene25184 uagpf v2.0 486
AutoFact: nudix hydrolase 1 [Arabidopsis thaliana] sp|Q9CA40.1|NUDT1_ARATH RecName: Full=Nudix hydrolase 1; Short=AtNUDT1; AltName: Full=Dihydroneopterin triphosphate pyrophosphohydrolase; Short=DHNTP pyrophosphohydrolase; AltName: Full=NADH pyrophosphatase gb|AAG5 9.0e-38
FL-Next: sp=Nudix hydrolase 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
N-terminus
uagpf_v2_unigene25312 uagpf v2.0 484
AutoFact: double-strand break repair protein MRE11 [Arabidopsis thaliana] sp|Q9XGM2.1|MRE11_ARATH RecName: Full=Double-strand break repair protein MRE11 emb|CAB50793.1| Mre11 protein [Arabidopsis thaliana] dbj|BAB10749.1| DNA repair and meiosis protein Mre11 [Arabi 1.0e-11
Blast2go: meiotic recombination 11 1.40712e-14
unknown
uagpf_v2_unigene30271 uagpf v2.0 229
AutoFact: replication factor C 110 kDa subunit [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: replication factor c subunit 1-like 0.0
N-terminus
uagpf_v2_unigene30603 uagpf v2.0 334
AutoFact: zf-C3HC4 multi-domain protein 9.0e-07
Blast2go: e3 ubiquitin-protein ligase rfwd3-like 4.70487e-23
unknown
uagpf_v2_unigene31316 uagpf v2.0 291
AutoFact: replication factor C1 [Arabidopsis thaliana] emb|CAC34494.1| replication factor C large subunit-like protein [Arabidopsis thaliana] gb|AAT47816.1| At5g22010 [Arabidopsis thaliana] gb|AED92968.1| replication factor C1 [Arabidopsis thaliana] 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: replication factor c subunit 1-like 0.0
Internal
uagpf_v2_unigene31612 uagpf v2.0 446
AutoFact: Replication factor C large subunit (Fragment) n=2 Tax=Poaceae RepID=Q8L6A5_9POAL 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: replication factor c subunit 1-like 0.0
C-terminus
uagpf_v2_unigene35283 uagpf v2.0 189
AutoFact: putative RecA protein [Oryza sativa Japonica Group] 8.0e-20
Blast2go: dna repair protein reca homolog mitochondrial-like 1.03698e-27
unknown
uagpf_v2_unigene44752 uagpf v2.0 137
AutoFact: double-strand break repair protein MRE11 [Arabidopsis thaliana] sp|Q9XGM2.1|MRE11_ARATH RecName: Full=Double-strand break repair protein MRE11 emb|CAB50793.1| Mre11 protein [Arabidopsis thaliana] dbj|BAB10749.1| DNA repair and meiosis protein Mre11 [Arabi 1.0e-11
Blast2go: meiotic recombination 11 1.40712e-14
unknown
uagpf_v2_unigene46437 uagpf v2.0 320
AutoFact: Replication factor C large subunit (Fragment) n=2 Tax=Poaceae RepID=Q8L6A5_9POAL 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: replication factor c subunit 1-like 0.0
Internal
uagpf_v2_unigene47895 uagpf v2.0 115
AutoFact: replication factor C 110 kDa subunit [Oryza sativa Japonica Group] 0.0
Blast2go: replication factor c subunit 1-like 0.0
unknown

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain