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Assembly Name: uagpf v2.0

Name: chloroplast stroma

Term: GO:0009570  Help

Source: GO from Blast2go

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene23 uagpf v2.0 534
AutoFact: tRNA intron endonuclease [Arabidopsis thaliana] dbj|BAA88628.1| tRNA intron endonuclease [Arabidopsis thaliana] 5.0e-35
Blast2go: trna intron endonuclease 0.0
unknown
uagpf_v2_unigene136 uagpf v2.0 287
AutoFact: Red chlorophyll catabolite reductase (Fragment) n=2 Tax=Pinaceae RepID=Q1ELT4_PINTA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: red chlorophyll catabolite reductase 0.0
C-terminus
uagpf_v2_unigene155 uagpf v2.0 1274
AutoFact: Thioredoxin peroxidase n=1 Tax=Elaeis guineensis RepID=B3TLV1_ELAGV 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 2-cys peroxiredoxin 0.0
Complete
uagpf_v2_unigene186 uagpf v2.0 235
AutoFact: putative ribosomal protein S5 [Oryza sativa Japonica Group] 3.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 30s ribosomal protein s5 7.22131e-26
C-terminus
uagpf_v2_unigene256 uagpf v2.0 363
AutoFact: Polynucleotide phosphorylase n=1 Tax=Pisum sativum RepID=O24288_PEA 0.0
FL-Next: tr=Polynucleotide phosphorylase; Pisum sativum (Garden pea). 0.0
Blast2go: polynucleotide phosphorylase 0.0
Internal
uagpf_v2_unigene287 uagpf v2.0 822
AutoFact: Ribosomal protein n=1 Tax=Picea sitchensis RepID=A9P244_PICSI 0.0
FL-Next: sp=Ribosomal protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 50s ribosomal protein l1 0.0
C-terminus
uagpf_v2_unigene304 uagpf v2.0 924
AutoFact: Os07g0631900 protein n=2 Tax=Oryza sativa RepID=Q8LHN4_ORYSJ 3.00018e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 33 kda chloroplastic-like 0.0
C-terminus
uagpf_v2_unigene305 uagpf v2.0 1447
AutoFact: Acetyl-CoA synthetase, putative n=1 Tax=Ricinus communis RepID=B9RGS6_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: acetyl- synthetase 0.0
C-terminus
uagpf_v2_unigene396 uagpf v2.0 422
AutoFact: auxin-induced putative CP12 domain-containing protein [Arachis hypogaea] 6.0e-21
Blast2go: chloroplast protein cp12 0.0
Coding
uagpf_v2_unigene437 uagpf v2.0 1588
AutoFact: RuBisCO large subunit-binding protein subunit alpha, chloroplastic n=9 Tax=fabids RepID=RUBA_PEA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ru large subunit-binding protein subunit chloroplastic-like 0.0
N-terminus
uagpf_v2_unigene596 uagpf v2.0 394
AutoFact: Histidinol dehydrogenase n=1 Tax=Picea sitchensis RepID=A9NV24_PICSI 0.0
FL-Next: sp=Histidinol dehydrogenase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histidinol dehydrogenase 0.0
N-terminus
uagpf_v2_unigene682 uagpf v2.0 445
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: tpr repeat 0.0
Putative C-terminus
uagpf_v2_unigene1062 uagpf v2.0 497
AutoFact: alanine aminotransferase [Oryza sativa Indica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: alanine-2-oxoglutarate aminotransferase 2 0.0
N-terminus
uagpf_v2_unigene1107 uagpf v2.0 1800
AutoFact: 4-nitrophenylphosphatase, putative n=1 Tax=Ricinus communis RepID=B9RM24_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: haloacid dehalogenase-like hydrolase domain-containing protein 0.0
Complete
uagpf_v2_unigene1114 uagpf v2.0 527
AutoFact: Chaperone clpb, putative n=1 Tax=Ricinus communis RepID=B9SJA7_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: chaperone protein chloroplastic-like 0.0
C-terminus
uagpf_v2_unigene1156 uagpf v2.0 1539
AutoFact: putative lactoylglutathione lyase, chloroplast [Arabidopsis thaliana] sp|Q8W593.1|LGUC_ARATH RecName: Full=Probable lactoylglutathione lyase, chloroplast; AltName: Full=Glyoxalase I; Flags: Precursor gb|AAL31884.1|AF419551_1 At1g67280/F1N21_10 [Arabidopsi 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: probable lactoylglutathione chloroplast-like 0.0
Complete
uagpf_v2_unigene1163 uagpf v2.0 426
AutoFact: plastid transcriptionally active 4 [Arabidopsis thaliana] sp|O80796.1|IM30_ARATH RecName: Full=Probable membrane-associated 30 kDa protein, chloroplastic; Flags: Precursor gb|AAC27135.1| Similar to chloroplast membrane-associated 30KD protein precursor (I 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
uagpf_v2_unigene1195 uagpf v2.0 1739
AutoFact: Cysteine synthase n=1 Tax=Picea sitchensis RepID=A9NS10_PICSI 0.0
FL-Next: sp=Cysteine synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cysteine synthase 0.0
Complete
uagpf_v2_unigene1274 uagpf v2.0 522
AutoFact: monothiol glutaredoxin-S16 [Arabidopsis thaliana] sp|Q8H7F6.2|GRS16_ARATH RecName: Full=Monothiol glutaredoxin-S16, chloroplastic; Short=AtGrxS16; AltName: Full=CAXIP1-like protein; Flags: Precursor gb|AAC27175.1| expressed protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: monothiol glutaredoxin-s16 0.0
C-terminus
uagpf_v2_unigene1278 uagpf v2.0 480
AutoFact: GTP-binding protein TypA [Trifolium pratense] 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: elongation factor family protein 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain