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Assembly Name: uagpf v2.0

Name: chloroplast stroma

Term: GO:0009570  Help

Source: GO from Blast2go

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene46386 uagpf v2.0 342
AutoFact: 5'-nucleotidase, cytosolic II-like n=2 Tax=Oryza sativa Japonica Group RepID=Q5NBD6_ORYSJ 0.0
FL-Next: tr=Cytosolic purine 5-nucleotidase, putative; Ricinus communis (Castor bean). 0.0
Blast2go: cytosolic purine 5 -nucleotidase-like 0.0
Internal
uagpf_v2_unigene46418 uagpf v2.0 355
AutoFact: Haloacid dehalogenase-like hydrolase family protein n=4 Tax=Arabidopsis RepID=Q680K2_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein chromosomal-like 0.0
C-terminus
uagpf_v2_unigene46485 uagpf v2.0 208
AutoFact: DEAD-box ATP-dependent RNA helicase 3 [Arabidopsis thaliana] gb|AAM26693.1| At5g26743 [Arabidopsis thaliana] gb|AAO42779.1| At5g26743 [Arabidopsis thaliana] gb|AED93564.1| DEAD-box ATP-dependent RNA helicase 3 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dead-box atp-dependent rna helicase chloroplastic-like 0.0
Internal
uagpf_v2_unigene46730 uagpf v2.0 280
AutoFact: SufE-like protein [Arabidopsis thaliana] sp|Q84W65.2|SUFE_ARATH RecName: Full=SufE-like protein, chloroplastic; AltName: Full=Protein EMBRYO DEFECTIVE 1374; Flags: Precursor emb|CAA18220.1| putative protein [Arabidopsis thaliana] emb|CAB79505.1| putative 0.0
Blast2go: protein 0.0
unknown
uagpf_v2_unigene46983 uagpf v2.0 388
AutoFact: PREDICTED: similar to ACA1 (autoinhibited Ca2+ -ATPase 1); calmodulin binding isoform 2 n=1 Tax=Vitis vinifera RepID=UPI0001983A3B 1.0e-18
FL-Next: sp=Calcium-transporting ATPase 1, plasma membrane-type; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: autoinhibited ca2+-atpase 1 4.69685e-21
N-terminus
uagpf_v2_unigene47014 uagpf v2.0 199
AutoFact: Thioredoxin-like 8 n=3 Tax=Zea mays RepID=B6TCX1_MAIZE 8.99634e-43
FL-Next: sp=Thioredoxin-like 3-2, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
Internal
uagpf_v2_unigene47039 uagpf v2.0 358
AutoFact: GTP1/OBG family protein [Arabidopsis thaliana] gb|AAM91598.1| GTP-binding protein obg-like [Arabidopsis thaliana] gb|AAP37780.1| At5g18570 [Arabidopsis thaliana] gb|AED92580.1| GTP1/OBG family protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: gtp1 obg family protein 0.0
Internal
uagpf_v2_unigene47073 uagpf v2.0 360
AutoFact: RecName: Full=50S ribosomal protein L4, chloroplastic; Short=R-protein L4; Flags: Precursor pdb|3BBO|G Chain G, Homology Model For The Spinach Chloroplast 50s Subunit Fitted To 9.4a Cryo-Em Map Of The 70s Chlororibosome emb|CAA75149.1| chloroplast ribosom 0.0
Blast2go: 50s ribosomal protein l4 0.0
unknown
uagpf_v2_unigene47171 uagpf v2.0 421
AutoFact: [I] COG2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases 3.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
uagpf_v2_unigene47353 uagpf v2.0 319
AutoFact: monothiol glutaredoxin-S16 [Arabidopsis thaliana] sp|Q8H7F6.2|GRS16_ARATH RecName: Full=Monothiol glutaredoxin-S16, chloroplastic; Short=AtGrxS16; AltName: Full=CAXIP1-like protein; Flags: Precursor gb|AAC27175.1| expressed protein [Arabidopsis thaliana] 0.0
FL-Next: sp=Monothiol glutaredoxin-S16, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: monothiol glutaredoxin-s16 0.0
Internal
uagpf_v2_unigene47731 uagpf v2.0 380
AutoFact: Putative elongation factor P (EF-P); 66839-65711 n=1 Tax=Arabidopsis thaliana RepID=Q9C9Y5_ARATH 3.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: elongation factor p 1.36316e-38
Internal
uagpf_v2_unigene48077 uagpf v2.0 385
AutoFact: Probable pyruvate, phosphate dikinase regulatory protein, chloroplastic n=4 Tax=Oryza sativa RepID=PDRP1_ORYSJ 0.0
FL-Next: Isoform 2 of Probable pyruvate, phosphate dikinase regulatory protein, chloroplastic OS=Oryza sativa subsp. japonica GN=PDRP1 0.0
Blast2go: pyruvate orthophosphate dikinase regulatory protein 0.0
Internal
uagpf_v2_unigene48432 uagpf v2.0 386
AutoFact: SufE-like protein [Arabidopsis thaliana] sp|Q84W65.2|SUFE_ARATH RecName: Full=SufE-like protein, chloroplastic; AltName: Full=Protein EMBRYO DEFECTIVE 1374; Flags: Precursor emb|CAA18220.1| putative protein [Arabidopsis thaliana] emb|CAB79505.1| putative 0.0
Blast2go: protein 0.0
unknown
uagpf_v2_unigene48523 uagpf v2.0 284
AutoFact: chloroplast polyprotein of elongation factor Ts precursor [Arabidopsis thaliana] 0.0
FL-Next: sp=Elongation factor Ts; Vitis vinifera (Grape). 0.0
Blast2go: protein 0.0
Internal
uagpf_v2_unigene48581 uagpf v2.0 396
AutoFact: Cell division protein ftsZ homolog 2-1, chloroplastic n=2 Tax=Arabidopsis RepID=FTZ21_ARATH 3.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: plastid division protein 3.07641e-26
Internal
uagpf_v2_unigene48627 uagpf v2.0 345
AutoFact: Similar to ribokinase [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ribokinase 0.0
Internal
uagpf_v2_unigene48647 uagpf v2.0 324
AutoFact: Putative 97B2-like cytochrome P450 n=1 Tax=Ginkgo biloba RepID=Q6J4G9_GINBI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cytochrome p450 0.0
Internal
uagpf_v2_unigene49090 uagpf v2.0 367
AutoFact: Chloroplast alpha-glucan water dikinase, putative n=1 Tax=Ricinus communis RepID=B9RXZ3_RICCO 0.0
FL-Next: sp=Phosphoglucan, water dikinase, chloroplastic; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: water dikinase 0.0
Internal
uagpf_v2_unigene49093 uagpf v2.0 380
AutoFact: ATP binding protein, putative n=1 Tax=Ricinus communis RepID=B9SJW4_RICCO 3.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 4.71665e-29
Putative N-terminus
uagpf_v2_unigene49116 uagpf v2.0 274
AutoFact: ATP binding protein, putative n=1 Tax=Ricinus communis RepID=B9SVM1_RICCO 2.0e-40
FL-Next: tr=ATP binding protein, putative; Ricinus communis (Castor bean). 0.0
Blast2go: chloroplast sensor kinase 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain