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Assembly Name: uagpf v2.0

Name: chloroplast stroma

Term: GO:0009570  Help

Source: GO from Blast2go

Ontology: Cellular Component

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
uagpf_v2_unigene37809 uagpf v2.0 258
• AutoFact: Similar to ribokinase [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ribokinase 0.0
C-terminus
uagpf_v2_unigene37842 uagpf v2.0 434
• AutoFact: DEAD-box ATP-dependent RNA helicase 3 [Arabidopsis thaliana] gb|AAM26693.1| At5g26743 [Arabidopsis thaliana] gb|AAO42779.1| At5g26743 [Arabidopsis thaliana] gb|AED93564.1| DEAD-box ATP-dependent RNA helicase 3 [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: dead-box atp-dependent rna helicase chloroplastic-like 0.0
Internal
uagpf_v2_unigene37891 uagpf v2.0 475
• AutoFact: ADP-ribosylation factor GTPase-activating protein AGD4 n=2 Tax=Arabidopsis RepID=AGD4_ARATH 2.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: arf-gap domain 4 2.44904e-38
Putative C-terminus
uagpf_v2_unigene38084 uagpf v2.0 504
• AutoFact: Pyruvate kinase isozyme A, chloroplastic n=3 Tax=Ricinus communis RepID=KPYA_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pyruvate kinase 0.0
N-terminus
uagpf_v2_unigene38086 uagpf v2.0 408
• AutoFact: N-acetyl-gamma-glutamyl-phosphate reductase n=1 Tax=Picea sitchensis RepID=A9NUH1_PICSI 0.0
• FL-Next: sp=N-acetyl-gamma-glutamyl-phosphate reductase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: n-acetyl-gamma-glutamyl-phosphate reductase 0.0
Internal
uagpf_v2_unigene38308 uagpf v2.0 393
• AutoFact: Elongation factor Tu n=3 Tax=Spermatophyta RepID=A9NWL9_PICSI 0.0
• FL-Next: sp=Elongation factor Tu; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: elongation factor chloroplastic-like 0.0
Internal
uagpf_v2_unigene38382 uagpf v2.0 435
• AutoFact: Unassigned protein
• Blast2go: protein 1.9381e-38
unknown
uagpf_v2_unigene38415 uagpf v2.0 415
• AutoFact: Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, putative n=1 Tax=Ricinus communis RepID=B9SQR9_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: aspartyl-trna glutamyl-trna amidotransferase subunit b 0.0
N-terminus
uagpf_v2_unigene38437 uagpf v2.0 612
• AutoFact: tRNA intron endonuclease [Arabidopsis thaliana] dbj|BAA88628.1| tRNA intron endonuclease [Arabidopsis thaliana] 5.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: trna intron endonuclease 0.0
C-terminus
uagpf_v2_unigene38560 uagpf v2.0 371
• AutoFact: Red chlorophyll catabolite reductase (Fragment) n=2 Tax=Pinaceae RepID=Q1ELT4_PINTA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: red chlorophyll catabolite reductase 0.0
N-terminus
uagpf_v2_unigene38569 uagpf v2.0 248
• AutoFact: Isoamylase isoform 3 n=1 Tax=Solanum tuberosum RepID=Q84YG5_SOLTU 0.0
• Blast2go: isoamylase chloroplastic-like 0.0
unknown
uagpf_v2_unigene38603 uagpf v2.0 397
• AutoFact: Pyruvate kinase isozyme A, chloroplastic n=3 Tax=Ricinus communis RepID=KPYA_RICCO 0.0
• FL-Next: sp=Pyruvate kinase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pyruvate kinase 0.0
Internal
uagpf_v2_unigene38605 uagpf v2.0 374
• AutoFact: 2-deoxyglucose-6-phosphate phosphatase, putative n=1 Tax=Ricinus communis RepID=B9RAP3_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein cbby 0.0
Putative N-terminus
uagpf_v2_unigene38651 uagpf v2.0 339
• AutoFact: acetyl-CoA synthetase [Arabidopsis thaliana] dbj|BAH19803.1| AT5G36880 [Arabidopsis thaliana] gb|AED94121.1| acetyl-CoA synthetase [Arabidopsis thaliana] 0.0
• FL-Next: tr=AMP binding protein; Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress). 0.0
• Blast2go: acetyl- synthetase 0.0
Internal
uagpf_v2_unigene38695 uagpf v2.0 297
• AutoFact: ATP binding protein, putative n=1 Tax=Ricinus communis RepID=B9SJW4_RICCO 0.0
• FL-Next: tr=Clavata-like receptor; Picea glauca (White spruce) (Pinus glauca). 0.0
• Blast2go: probable inactive leucine-rich repeat receptor-like protein kinase at1g66830-like 0.0
Internal
uagpf_v2_unigene38703 uagpf v2.0 375
• AutoFact: Magnesium chelatase ATPase subunit I n=4 Tax=BEP clade RepID=Q53RM0_ORYSJ 0.0
• Blast2go: magnesium-chelatase subunit chli 0.0
unknown
uagpf_v2_unigene38708 uagpf v2.0 537
• AutoFact: cobW multi-domain protein 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: prli-interacting factor 0.0
Internal
uagpf_v2_unigene38728 uagpf v2.0 391
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: uncharacterized protein 0.0
N-terminus
uagpf_v2_unigene38978 uagpf v2.0 259
• AutoFact: Arsenical pump-driving atpase, putative n=1 Tax=Ricinus communis RepID=B9SY64_RICCO 0.0
• Blast2go: arsenical pump-driving atpase-like 0.0
Putative coding
uagpf_v2_unigene38991 uagpf v2.0 367
• AutoFact: adenosine monophosphate kinase [Arabidopsis thaliana] sp|Q9FIJ7.1|KADC2_ARATH RecName: Full=Probable adenylate kinase 2, chloroplastic; Short=AK 2; AltName: Full=ATP-AMP transphosphorylase 2; Flags: Precursor dbj|BAB11331.1| unnamed protein product [Arabi 0.0
• Blast2go: adenylate kinase 0.0
Coding

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain