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Assembly Name: uagpf v2.0

Name: chloroplast stroma

Term: GO:0009570  Help

Source: GO from Blast2go

Ontology: Cellular Component

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
uagpf_v2_unigene36580 uagpf v2.0 387
• AutoFact: FtsZ1 n=1 Tax=Marchantia polymorpha RepID=Q84K12_MARPO 0.0
• Blast2go: cell division protein ftsz homolog chloroplastic-like 0.0
unknown
uagpf_v2_unigene36596 uagpf v2.0 587
• AutoFact: Elongation factor EF-P n=2 Tax=Arabidopsis RepID=Q8VZW6_ARATH 5.0e-40
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: elongation factor p 0.0
Putative N-terminus
uagpf_v2_unigene36607 uagpf v2.0 683
• AutoFact: putative fructokinase [Oryza sativa Japonica Group] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pfkb-type carbohydrate kinase family protein 0.0
N-terminus
uagpf_v2_unigene36647 uagpf v2.0 603
• AutoFact: Scarecrow-like 1 transcription factor (Fragment) n=1 Tax=Pinus pinaster RepID=B1PPU0_PINPS 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: gras family transcription factor 0.0
C-terminus
uagpf_v2_unigene36824 uagpf v2.0 549
• AutoFact: plastid transcriptionally active 17 protein [Arabidopsis thaliana] gb|AAF27129.1|AC018849_17 hypothetical protein; 58060-60358 [Arabidopsis thaliana] gb|AAT47799.1| At1g80480 [Arabidopsis thaliana] gb|AAU05519.1| At1g80480 [Arabidopsis thaliana] gb|AEE364 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: cobw domain-containing protein 2-like isoform 2 0.0
N-terminus
uagpf_v2_unigene36829 uagpf v2.0 342
• AutoFact: Amino acid binding protein, putative n=1 Tax=Ricinus communis RepID=B9S5B3_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: act domain-containing protein 0.0
C-terminus
uagpf_v2_unigene36913 uagpf v2.0 426
• AutoFact: ATP-binding cassette transporter, subfamily I, member 8, ABC component protein PpABCI8 n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SDL5_PHYPA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: abc transporter atpase 0.0
N-terminus
uagpf_v2_unigene37015 uagpf v2.0 664
• AutoFact: ATP-dependent Clp protease ATP-binding subunit clpA homolog CD4B, chloroplastic n=3 Tax=core eudicotyledons RepID=CLPAB_SOLLC 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: chaperone protein chloroplastic-like 0.0
Internal
uagpf_v2_unigene37061 uagpf v2.0 372
• AutoFact: phosphoribosylanthranilate transferase [Arabidopsis thaliana] gb|AAO42464.1| phosphorybosyl anthranilate transferase 1 [Arabidopsis thaliana] 0.0
• Blast2go: anthranilate phosphoribosyltransferase 0.0
Putative coding
uagpf_v2_unigene37100 uagpf v2.0 482
• AutoFact: Putative DnaJ protein n=1 Tax=Camellia sinensis RepID=Q2L989_CAMSI 2.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
N-terminus
uagpf_v2_unigene37130 uagpf v2.0 413
• AutoFact: DAG protein, putative [Arabidopsis thaliana] 1.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: plastid developmental partial 0.0
Internal
uagpf_v2_unigene37163 uagpf v2.0 487
• AutoFact: ATP-dependent Clp protease ATP-binding subunit clpA homolog CD4B, chloroplastic n=3 Tax=core eudicotyledons RepID=CLPAB_SOLLC 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: chaperone protein chloroplastic-like 0.0
Internal
uagpf_v2_unigene37294 uagpf v2.0 380
• AutoFact: Acyl-[acyl-carrier-protein] desaturase n=1 Tax=Picea sitchensis RepID=A9NVD4_PICSI 5.0e-37
• FL-Next: sp=Acyl-[acyl-carrier-protein] desaturase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: stearoyl-acyl carrier protein desaturase 3.08286e-44
N-terminus
uagpf_v2_unigene37314 uagpf v2.0 326
• AutoFact: 30S ribosomal protein S5, putative n=1 Tax=Ricinus communis RepID=B9RBC3_RICCO 1.96182e-44
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: 30s ribosomal protein s5 0.0
C-terminus
uagpf_v2_unigene37359 uagpf v2.0 548
• AutoFact: Isoamylase isoform 3 n=1 Tax=Solanum tuberosum RepID=Q84YG5_SOLTU 0.0
• FL-Next: sp=Isoamylase 3, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: isoamylase chloroplastic-like 0.0
Internal
uagpf_v2_unigene37497 uagpf v2.0 421
• AutoFact: Chaperone protein dnaJ 8, chloroplast, putative n=1 Tax=Ricinus communis RepID=B9RGM8_RICCO 2.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: chaperone protein dnaj chloroplast 0.0
N-terminus
uagpf_v2_unigene37640 uagpf v2.0 437
• AutoFact: pfam05193, Peptidase_M16_C, Peptidase M16 inactive domain 6.0e-19
• Blast2go: protein 0.0
unknown
uagpf_v2_unigene37667 uagpf v2.0 419
• AutoFact: Chloroplast alpha-glucan water dikinase, putative n=1 Tax=Ricinus communis RepID=B9RXZ3_RICCO 0.0
• FL-Next: sp=Phosphoglucan, water dikinase, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: water dikinase 0.0
C-terminus
uagpf_v2_unigene37684 uagpf v2.0 406
• AutoFact: Glutamyl-tRNA n=1 Tax=Zea mays RepID=B6U151_MAIZE 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: glutamyl-trna amidotransferase subunit a 0.0
N-terminus
uagpf_v2_unigene37717 uagpf v2.0 280
• AutoFact: [S] COG0718 Uncharacterized protein conserved in bacteria 3.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: uncharacterized protein 0.0
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain