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Assembly Name: uagpf v2.0

Name: chloroplast stroma

Term: GO:0009570  Help

Source: GO from Blast2go

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene27602 uagpf v2.0 406
AutoFact: elongation factor Ts family protein [Arabidopsis thaliana] emb|CAB43920.1| putative protein [Arabidopsis thaliana] emb|CAB79664.1| putative protein [Arabidopsis thaliana] gb|AAL10483.1| AT4g29060/F19B15_90 [Arabidopsis thaliana] gb|AEE85580.1| elongation 0.0
Blast2go: protein 0.0
unknown
uagpf_v2_unigene27648 uagpf v2.0 487
AutoFact: putative 3-isopropylmalate dehydrogenase [Oryza sativa Japonica Group] gb|ABF97968.1| 3-isopropylmalate dehydrogenase 2, chloroplast precursor, putative, expressed [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 3-isopropylmalate dehydrogenase 0.0
Internal
uagpf_v2_unigene27854 uagpf v2.0 343
AutoFact: Amino acid binding protein, putative n=1 Tax=Ricinus communis RepID=B9SAK5_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: amino acid binding 0.0
N-terminus
uagpf_v2_unigene27878 uagpf v2.0 451
AutoFact: D-ribulose-5-phosphate-3-epimerase n=2 Tax=Arabidopsis RepID=Q9SAU2_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ribulose-phosphate 3- chloroplastic-like 0.0
Internal
uagpf_v2_unigene28060 uagpf v2.0 475
AutoFact: 50S ribosomal protein L27, chloroplastic n=1 Tax=Nicotiana tabacum RepID=RK27_TOBAC 1.4013e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 50s ribosomal protein l27 0.0
N-terminus
uagpf_v2_unigene28419 uagpf v2.0 435
AutoFact: Pyruvate kinase n=2 Tax=Populus trichocarpa RepID=B9HKC4_POPTR 0.0
Blast2go: pyruvate kinase 0.0
unknown
uagpf_v2_unigene28532 uagpf v2.0 192
AutoFact: lipoamide dehydrogenase 1 [Arabidopsis thaliana] gb|AEE75888.1| lipoamide dehydrogenase 1 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dihydrolipoyl dehydrogenase-like 0.0
Internal
uagpf_v2_unigene28543 uagpf v2.0 400
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: uncharacterized protein 0.0
N-terminus
uagpf_v2_unigene28581 uagpf v2.0 323
AutoFact: ATP binding protein, putative n=1 Tax=Ricinus communis RepID=B9SVM1_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: gaf sensor signal transduction histidine kinase 0.0
Internal
uagpf_v2_unigene28665 uagpf v2.0 385
AutoFact: pfam05193, Peptidase_M16_C, Peptidase M16 inactive domain 6.0e-19
Blast2go: protein 0.0
unknown
uagpf_v2_unigene28773 uagpf v2.0 503
AutoFact: Catalase n=3 Tax=Picea sitchensis RepID=A9NUY8_PICSI 0.0
FL-Next: sp=Catalase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: catalase 0.0
Internal
uagpf_v2_unigene28909 uagpf v2.0 464
AutoFact: Metal ion binding protein, putative n=1 Tax=Ricinus communis RepID=B9RUE7_RICCO 7.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
uagpf_v2_unigene28962 uagpf v2.0 278
AutoFact: Glutamate-1-semialdehyde 2,1-aminomutase, chloroplastic n=6 Tax=Poaceae RepID=GSA_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: glutamate 1-semialdehyde aminotransferase 0.0
N-terminus
uagpf_v2_unigene29001 uagpf v2.0 191
AutoFact: PsbP domain-containing protein 4 [Arabidopsis thaliana] sp|O49292.2|PPD4_ARATH RecName: Full=PsbP domain-containing protein 4, chloroplastic; AltName: Full=OEC23-like protein 5; Flags: Precursor gb|AEE35933.1| PsbP domain-containing protein 4 [Arabidopsis 0.0
Blast2go: psbp domain-containing protein chloroplastic-like 0.0
unknown
uagpf_v2_unigene29071 uagpf v2.0 306
AutoFact: thioredoxin-like 4 [Arabidopsis thaliana] sp|Q9C5C5.1|TRL4_ARATH RecName: Full=Thioredoxin-like 4, chloroplastic; AltName: Full=Lilium-type thioredoxin 3; Flags: Precursor gb|AAK28642.1|AF360345_1 unknown protein [Arabidopsis thaliana] gb|AAK93759.1| unkn 4.0e-15
Blast2go: thioredoxin-like 4 4.86455e-23
unknown
uagpf_v2_unigene29129 uagpf v2.0 380
AutoFact: phosphoribosylanthranilate transferase [Arabidopsis thaliana] gb|AAO42464.1| phosphorybosyl anthranilate transferase 1 [Arabidopsis thaliana] 0.0
FL-Next: sp=Anthranilate phosphoribosyltransferase, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: anthranilate phosphoribosyltransferase 0.0
Internal
uagpf_v2_unigene29307 uagpf v2.0 528
AutoFact: haloacid dehalogenase-like hydrolase domain-containing protein [Arabidopsis thaliana] gb|AAL38840.1| unknown protein [Arabidopsis thaliana] gb|AEE33400.1| haloacid dehalogenase-like hydrolase domain-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nhl repeat-containing protein 2-like 0.0
Internal
uagpf_v2_unigene29310 uagpf v2.0 334
AutoFact: Ribokinase, putative n=1 Tax=Ricinus communis RepID=B9SU49_RICCO 2.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ribokinase 1.99858e-35
N-terminus
uagpf_v2_unigene29437 uagpf v2.0 562
AutoFact: DEAD-box ATP-dependent RNA helicase 3 [Arabidopsis thaliana] gb|AAM26693.1| At5g26743 [Arabidopsis thaliana] gb|AAO42779.1| At5g26743 [Arabidopsis thaliana] gb|AED93564.1| DEAD-box ATP-dependent RNA helicase 3 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dead-box atp-dependent rna helicase chloroplastic-like 0.0
N-terminus
uagpf_v2_unigene29593 uagpf v2.0 289
AutoFact: Fruit protein PKIWI502, putative n=1 Tax=Ricinus communis RepID=B9T1V7_RICCO 0.0
FL-Next: sp=Fruit protein pKIWI502; Actinidia deliciosa (Kiwi). 0.0
Blast2go: fruit protein pkiwi502 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain