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Assembly Name: uagpf v2.0

Name: chloroplast stroma

Term: GO:0009570  Help

Source: GO from Blast2go

Ontology: Cellular Component

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
uagpf_v2_unigene19980 uagpf v2.0 2654
• AutoFact: TCP-1/cpn60 chaperonin family protein [Arabidopsis thaliana] dbj|BAB01754.1| GloEL protein; chaperonin, 60 kDa [Arabidopsis thaliana] gb|AEE75362.1| TCP-1/cpn60 chaperonin family protein [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: isco large subunit-binding protein subunit beta 0.0
Complete
uagpf_v2_unigene20059 uagpf v2.0 1742
• AutoFact: chaperonin-60 beta subunit [Solanum tuberosum] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: tcp-1 cpn60 chaperonin family protein 0.0
N-terminus
uagpf_v2_unigene20486 uagpf v2.0 1079
• AutoFact: Oligopeptidase A n=5 Tax=Arabidopsis RepID=Q9LSL3_ARATH 4.0e-07
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: oligopeptidase a 3.68884e-07
C-terminus
uagpf_v2_unigene20488 uagpf v2.0 548
• AutoFact: Zincin-like metalloproteases family protein [Arabidopsis thaliana] gb|AAK76610.1| putative oligopeptidase A [Arabidopsis thaliana] gb|AAN13220.1| putative oligopeptidase A [Arabidopsis thaliana] gb|AED98078.1| Zincin-like metalloproteases family protein [ 3.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: oligopeptidase a-like 1.60849e-37
C-terminus
uagpf_v2_unigene25044 uagpf v2.0 426
• AutoFact: putative 3-isopropylmalate dehydrogenase [Oryza sativa Japonica Group] gb|ABF97968.1| 3-isopropylmalate dehydrogenase 2, chloroplast precursor, putative, expressed [Oryza sativa Japonica Group] 0.0
• FL-Next: sp=3-isopropylmalate dehydrogenase 3, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: 3-isopropylmalate dehydrogenase 0.0
C-terminus
uagpf_v2_unigene25305 uagpf v2.0 572
• AutoFact: 30S ribosomal protein S20, putative n=1 Tax=Ricinus communis RepID=B9T1X1_RICCO 6.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: 30s ribosomal protein s20 0.0
Putative Complete
uagpf_v2_unigene25315 uagpf v2.0 647
• AutoFact: Magnesium chelatase ATPase subunit I n=4 Tax=BEP clade RepID=Q53RM0_ORYSJ 0.0
• FL-Next: sp=Magnesium-chelatase subunit chlI, chloroplastic; Nicotiana tabacum (Common tobacco). 0.0
• Blast2go: magnesium-chelatase subunit chli 0.0
C-terminus
uagpf_v2_unigene25478 uagpf v2.0 568
• AutoFact: monodehydroascorbate reductase [Spinacia oleracea] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: monodehydroascorbate reductase 0.0
Internal
uagpf_v2_unigene25489 uagpf v2.0 415
• AutoFact: monothiol glutaredoxin-S16 [Arabidopsis thaliana] sp|Q8H7F6.2|GRS16_ARATH RecName: Full=Monothiol glutaredoxin-S16, chloroplastic; Short=AtGrxS16; AltName: Full=CAXIP1-like protein; Flags: Precursor gb|AAC27175.1| expressed protein [Arabidopsis thaliana] 0.0
• Blast2go: monothiol glutaredoxin-s16 0.0
unknown
uagpf_v2_unigene25532 uagpf v2.0 561
• AutoFact: Pyruvate kinase n=2 Tax=Populus trichocarpa RepID=B9HKC4_POPTR 0.0
• FL-Next: sp=Pyruvate kinase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pyruvate kinase 0.0
C-terminus
uagpf_v2_unigene25541 uagpf v2.0 521
• AutoFact: Thylakoid lumenal 17.4 kDa protein, chloroplast, putative n=1 Tax=Ricinus communis RepID=B9SJT2_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: thylakoid lumenal protein 0.0
C-terminus
uagpf_v2_unigene25555 uagpf v2.0 445
• AutoFact: indole-3-glycerol phosphate synthase [Arabidopsis thaliana] gb|AED95636.1| indole-3-glycerol phosphate synthase [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: indole-3-glycerol phosphate synthase 0.0
C-terminus
uagpf_v2_unigene25585 uagpf v2.0 440
• AutoFact: Probable alanyl-tRNA synthetase, chloroplastic n=1 Tax=Populus trichocarpa RepID=SYAP_POPTR 0.0
• FL-Next: sp=Probable alanyl-tRNA synthetase, chloroplastic; Sorghum bicolor (Sorghum) (Sorghum vulgare). 0.0
• Blast2go: alanyl-trna synthetase 0.0
C-terminus
uagpf_v2_unigene25659 uagpf v2.0 604
• AutoFact: Phosphoprotein phosphatase, putative n=1 Tax=Ricinus communis RepID=B9RA78_RICCO 0.0
• Blast2go: dual specificity protein phosphatase family protein 0.0
unknown
uagpf_v2_unigene25776 uagpf v2.0 295
• AutoFact: prolyl-tRNA synthetase [Raphanus sativus] 0.0
• Blast2go: prolyl-trna synthetase 0.0
unknown
uagpf_v2_unigene25828 uagpf v2.0 527
• AutoFact: 30S ribosomal protein S1, chloroplastic n=1 Tax=Spinacia oleracea RepID=RR1_SPIOL 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ribosomal protein s1 0.0
C-terminus
uagpf_v2_unigene25868 uagpf v2.0 297
• AutoFact: RecName: Full=Peptidyl-prolyl cis-trans isomerase, chloroplastic; AltName: Full=40 kDa thylakoid lumen PPIase; AltName: Full=40 kDa thylakoid lumen rotamase; Flags: Precursor emb|CAA72792.1| thylakoid lumen rotamase [Spinacia oleracea] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: peptidyl-prolyl cis-trans isomerase chloroplastic-like 0.0
C-terminus
uagpf_v2_unigene25908 uagpf v2.0 549
• AutoFact: UDP-sulfoquinovose synthase n=1 Tax=Solanum lycopersicum RepID=C0LIR3_SOLLC 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: udp-sulfoquinovose synthase 0.0
N-terminus
uagpf_v2_unigene25935 uagpf v2.0 450
• AutoFact: alpha/beta-hydrolase domain-containing protein [Arabidopsis thaliana] gb|AAG52116.1|AC023064_9 unknown protein; 42479-41336 [Arabidopsis thaliana] dbj|BAD42933.1| unknown protein [Arabidopsis thaliana] gb|AEE31790.1| alpha/beta-hydrolase domain-containing 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: alpha beta-hydrolase domain-containing protein 0.0
C-terminus
uagpf_v2_unigene26077 uagpf v2.0 372
• AutoFact: PREDICTED: similar to Protein translocase subunit secA, chloroplastic n=1 Tax=Vitis vinifera RepID=UPI0001983A2B 0.0
• Blast2go: protein translocase subunit chloroplastic-like 0.0
unknown

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain