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Assembly Name: uagpf v2.0

Name: chloroplast stroma

Term: GO:0009570  Help

Source: GO from Blast2go

Ontology: Cellular Component

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
uagpf_v2_unigene13400 uagpf v2.0 644
• AutoFact: Elongation factor Tu n=3 Tax=Spermatophyta RepID=A9NWL9_PICSI 0.0
• FL-Next: sp=Elongation factor Tu; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: elongation factor chloroplastic-like 0.0
N-terminus
uagpf_v2_unigene13415 uagpf v2.0 743
• AutoFact: elongation factor EF-P [Arabidopsis thaliana] gb|AAL36090.1| putative elongation factor P (EF-P) [Arabidopsis thaliana] gb|AAM51349.1| putative elongation factor P (EF-P) [Arabidopsis thaliana] gb|AAM64282.1| putative elongation factor P (EF-P) [Arabidops 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: elongation factor p 0.0
C-terminus
uagpf_v2_unigene13516 uagpf v2.0 460
• AutoFact: RecName: Full=Peptidyl-prolyl cis-trans isomerase, chloroplastic; AltName: Full=40 kDa thylakoid lumen PPIase; AltName: Full=40 kDa thylakoid lumen rotamase; Flags: Precursor emb|CAA72792.1| thylakoid lumen rotamase [Spinacia oleracea] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: peptidyl-prolyl cis-trans isomerase chloroplastic-like 0.0
N-terminus
uagpf_v2_unigene13527 uagpf v2.0 491
• AutoFact: (E)-4-hydroxy-3-methyl-but-2-enyl diphosphate synthase n=1 Tax=Ginkgo biloba RepID=A9CBE3_GINBI 0.0
• FL-Next: tr=(E)-4-hydroxy-3-methyl-but-2-enyl diphosphate synthase; Ginkgo biloba (Ginkgo) (Maidenhair tree). 0.0
• Blast2go: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 0.0
C-terminus
uagpf_v2_unigene13569 uagpf v2.0 1026
• AutoFact: Glutamate-1-semialdehyde 2,1-aminomutase, chloroplastic n=6 Tax=Poaceae RepID=GSA_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: glutamate 1-semialdehyde aminotransferase 0.0
Internal
uagpf_v2_unigene13580 uagpf v2.0 584
• AutoFact: Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, putative n=1 Tax=Ricinus communis RepID=B9SQR9_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: aspartyl-trna glutamyl-trna amidotransferase subunit b 0.0
C-terminus
uagpf_v2_unigene13599 uagpf v2.0 614
• AutoFact: Rossmann-fold NAD(P)-binding domain-containing protein [Arabidopsis thaliana] gb|AAL38267.1| unknown protein [Arabidopsis thaliana] gb|AAM47876.1| unknown protein [Arabidopsis thaliana] gb|AEC09632.1| Rossmann-fold NAD(P)-binding domain-containing protein 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: rossmann-fold nad -binding domain-containing protein 0.0
C-terminus
uagpf_v2_unigene13637 uagpf v2.0 472
• AutoFact: pfam00106, adh_short, short chain dehydrogenase 9.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: arp protein 0.0
Putative N-terminus
uagpf_v2_unigene13673 uagpf v2.0 474
• AutoFact: Glycolate oxidase n=1 Tax=Zantedeschia aethiopica RepID=Q84LB8_ZANAE 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: glycolate oxidase 0.0
N-terminus
uagpf_v2_unigene13808 uagpf v2.0 531
• AutoFact: putative myosin [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: myosin-like protein 0.0
Internal
uagpf_v2_unigene13881 uagpf v2.0 508
• AutoFact: Os07g0631900 protein n=2 Tax=Oryza sativa RepID=Q8LHN4_ORYSJ 3.00018e-42
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: 33 kda chloroplastic-like 0.0
Putative N-terminus
uagpf_v2_unigene13904 uagpf v2.0 604
• AutoFact: ATP binding protein, putative n=1 Tax=Ricinus communis RepID=B9SVM1_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: gaf sensor signal transduction histidine kinase 0.0
C-terminus
uagpf_v2_unigene14027 uagpf v2.0 635
• AutoFact: haloacid dehalogenase-like hydrolase domain-containing protein [Arabidopsis thaliana] ref|NP_198485.2| 2-phosphoglycolate phosphatase 1 [Arabidopsis thaliana] ref|NP_001119316.1| 2-phosphoglycolate phosphatase 1 [Arabidopsis thaliana] ref|NP_001119318.1| 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: haloacid dehalogenase-like hydrolase domain-containing protein 0.0
C-terminus
uagpf_v2_unigene14079 uagpf v2.0 526
• AutoFact: ATP-dependent Clp protease ATP-binding subunit clpA homolog CD4B, chloroplastic n=3 Tax=core eudicotyledons RepID=CLPAB_SOLLC 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: chaperone protein chloroplastic-like 0.0
C-terminus
uagpf_v2_unigene14180 uagpf v2.0 447
• AutoFact: Probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1 n=1 Tax=Populus trichocarpa RepID=MTBC_POPTR 0.0
• FL-Next: sp=Probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1; subsp. trichocarpa). 0.0
• Blast2go: probable bifunctional methylthioribulose-1-phosphate dehydratase enolase-phosphatase e1-like 0.0
N-terminus
uagpf_v2_unigene14269 uagpf v2.0 729
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: binding protein 0.0
N-terminus
uagpf_v2_unigene14279 uagpf v2.0 695
• AutoFact: Iron-sulfur assembly protein IscA, chloroplastic n=3 Tax=Arabidopsis RepID=ISCAP_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: iron-sulfur assembly protein 0.0
Complete
uagpf_v2_unigene14424 uagpf v2.0 1002
• AutoFact: 3-isopropylmalate dehydratase, putative n=1 Tax=Ricinus communis RepID=B9SXE3_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: 3-isopropylmalate small subunit 0.0
Putative Complete
uagpf_v2_unigene14432 uagpf v2.0 943
• AutoFact: Nucleoside diphosphate kinase n=1 Tax=Ricinus communis RepID=B9RAM1_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: nucleoside diphosphate kinase 0.0
Complete
uagpf_v2_unigene14553 uagpf v2.0 440
• AutoFact: Malonyl-CoA:ACP transacylase 1-3 n=3 Tax=Arachis hypogaea RepID=D8KXY7_ARAHY 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: malonyl- :acyl carrier protein transacylase 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain