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Assembly Name: uagpf v2.0

Name: intracellular protein transport

Term: GO:0006886  Help

Source: GO from Blast2go

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene28180 uagpf v2.0 557
AutoFact: AP-3 complex subunit delta [Arabidopsis thaliana] ref|NP_849785.1| AP-3 complex subunit delta [Arabidopsis thaliana] ref|NP_001031156.1| AP-3 complex subunit delta [Arabidopsis thaliana] sp|Q9C744.1|AP3D_ARATH RecName: Full=AP-3 complex subunit delta; Alt 6.02558e-44
FL-Next: sp=AP-3 complex subunit delta; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: ap-3 complex subunit delta 0.0
N-terminus
uagpf_v2_unigene28378 uagpf v2.0 450
AutoFact: vacuolar protein sorting-associated protein 45-like protein [Arabidopsis thaliana] sp|O49048.2|VPS45_ARATH RecName: Full=Vacuolar protein sorting-associated protein 45 homolog; Short=AtVPS45 gb|AAC34344.1| AtVPS45p [Arabidopsis thaliana] gb|AAK91388.1| At 0.0
FL-Next: sp=Vacuolar protein sorting-associated protein 45 homolog; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: vacuolar protein sorting-associated protein 45 homolog 0.0
N-terminus
uagpf_v2_unigene28731 uagpf v2.0 491
AutoFact: protein transport protein SEC23 [Arabidopsis thaliana] dbj|BAB02785.1| protein transport protein Sec23 [Arabidopsis thaliana] gb|AAO22730.1| putative transport protein [Arabidopsis thaliana] gb|AAO50656.1| putative transport protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein Sb0010s021250; Sorghum bicolor (Sorghum) (Sorghum vulgare). 0.0
Blast2go: protein transport protein sec23 0.0
Internal
uagpf_v2_unigene28793 uagpf v2.0 456
AutoFact: putative tethering factor SEC34 (ISS) [Ostreococcus tauri] emb|CAL52453.1| putative tethering factor SEC34 (ISS) [Ostreococcus tauri] 0.0
Blast2go: sec34-like protein 0.0
Putative coding
uagpf_v2_unigene28881 uagpf v2.0 390
AutoFact: Coatomer alpha subunit n=1 Tax=Hordeum vulgare subsp. vulgare RepID=Q6RYF4_HORVD 0.0
FL-Next: sp=Coatomer subunit alpha-1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: coatomer alpha 0.0
Internal
uagpf_v2_unigene29448 uagpf v2.0 367
AutoFact: Coatomer alpha subunit n=1 Tax=Hordeum vulgare subsp. vulgare RepID=Q6RYF4_HORVD 0.0
FL-Next: sp=Coatomer subunit alpha-3; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: coatomer alpha 0.0
Internal
uagpf_v2_unigene29856 uagpf v2.0 501
AutoFact: putative tethering factor SEC34 (ISS) [Ostreococcus tauri] emb|CAL52453.1| putative tethering factor SEC34 (ISS) [Ostreococcus tauri] 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: sec34-like protein 0.0
Internal
uagpf_v2_unigene30280 uagpf v2.0 205
AutoFact: Coatomer alpha subunit n=1 Tax=Hordeum vulgare subsp. vulgare RepID=Q6RYF4_HORVD 0.0
FL-Next: sp=Coatomer subunit alpha-3; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: coatomer alpha 0.0
Internal
uagpf_v2_unigene31805 uagpf v2.0 270
AutoFact: coatomer subunit beta-1 [Arabidopsis thaliana] ref|NP_001190880.1| coatomer subunit beta-1 [Arabidopsis thaliana] sp|Q9SV21.2|COPB1_ARATH RecName: Full=Coatomer subunit beta-1; AltName: Full=Beta-coat protein 1; Short=Beta-COP 1 gb|AEE85918.1| coatomer su 0.0
FL-Next: sp=Coatomer subunit beta; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: coatomer subunit beta-1 0.0
Internal
uagpf_v2_unigene31956 uagpf v2.0 391
AutoFact: Gamma-soluble NSF attachment protein [Arabidopsis thaliana] sp|Q9SPE5.1|SNAG_ARATH RecName: Full=Gamma-soluble NSF attachment protein; Short=Gamma-SNAP; AltName: Full=N-ethylmaleimide-sensitive factor attachment protein gamma gb|AAF01285.1|AF177990_1 gamm 3.0e-36
Blast2go: gamma-soluble nsf attachment protein 0.0
Putative coding
uagpf_v2_unigene32012 uagpf v2.0 1045
AutoFact: protein transport protein SEC23 [Arabidopsis thaliana] dbj|BAB02785.1| protein transport protein Sec23 [Arabidopsis thaliana] gb|AAO22730.1| putative transport protein [Arabidopsis thaliana] gb|AAO50656.1| putative transport protein [Arabidopsis thaliana] 0.0
FL-Next: tr=At1g05520/T25N20_16; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: protein transport protein sec23 0.0
Internal
uagpf_v2_unigene32342 uagpf v2.0 386
AutoFact: coatomer alpha subunit-like protein [Lotus japonicus] 0.0
FL-Next: sp=Coatomer subunit alpha-2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: coatomer alpha 0.0
Internal
uagpf_v2_unigene32481 uagpf v2.0 290
AutoFact: Alpha/beta-hydrolase family protein-like protein n=8 Tax=Camelineae RepID=F4JKN4_ARATH 7.0e-24
FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
Blast2go: binding protein 5.07287e-30
C-terminus
uagpf_v2_unigene33489 uagpf v2.0 350
AutoFact: Knolle n=1 Tax=Capsicum annuum RepID=Q9SML5_CAPAN 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: qa- sso1 syntaxin1- syp12a-group 0.0
Internal
uagpf_v2_unigene33869 uagpf v2.0 408
AutoFact: pfam03810, IBN_N, Importin-beta N-terminal domain 2.0e-09
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: protein 7.28675e-44
N-terminus
uagpf_v2_unigene34220 uagpf v2.0 341
AutoFact: armadillo/beta-catenin-like repeat-containing protein [Arabidopsis thaliana] dbj|BAB09724.1| importin beta [Arabidopsis thaliana] gb|AED96362.1| armadillo/beta-catenin-like repeat-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
uagpf_v2_unigene34316 uagpf v2.0 295
AutoFact: sec23/sec24-like transport protein [Arabidopsis thaliana] gb|AAO29951.1| Unknown protein [Arabidopsis thaliana] gb|AAQ56793.1| At5g43670 [Arabidopsis thaliana] gb|AED94993.1| sec23/sec24-like transport protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: protein transport protein sec23 0.0
Internal
uagpf_v2_unigene34636 uagpf v2.0 327
AutoFact: syntaxin [Glycine max] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: syntaxin 0.0
Internal
uagpf_v2_unigene35089 uagpf v2.0 495
AutoFact: Putative leucine-rich repeat-containing protein DDB_G0290503 n=1 Tax=Dictyostelium discoideum RepID=LRRX1_DICDI 4.0e-10
Blast2go: gcc2 protein 8.98273e-11
Coding
uagpf_v2_unigene36792 uagpf v2.0 616
AutoFact: protein transport protein SEC23 [Arabidopsis thaliana] dbj|BAB02785.1| protein transport protein Sec23 [Arabidopsis thaliana] gb|AAO22730.1| putative transport protein [Arabidopsis thaliana] gb|AAO50656.1| putative transport protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Volvox carteri (Green alga). 0.0
Blast2go: protein transport protein sec23 0.0
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain