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Assembly Name: uagpf v2.0

Name: vesicle-mediated transport

Term: GO:0016192  Help

Source: GO from Blast2go

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene22 uagpf v2.0 213
AutoFact: clathrin adaptor complexes medium subunit-like protein [Arabidopsis thaliana] gb|AEE33412.1| clathrin adaptor complexes medium subunit-like protein [Arabidopsis thaliana] 0.0
Blast2go: protein 0.0
unknown
uagpf_v2_unigene446 uagpf v2.0 461
AutoFact: Sorting nexin-4, putative n=1 Tax=Ricinus communis RepID=B9RRH9_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: phox domain-containing protein 0.0
Putative N-terminus
uagpf_v2_unigene520 uagpf v2.0 880
AutoFact: AP-1 complex subunit gamma-2, putative n=1 Tax=Ricinus communis RepID=B9S1S1_RICCO 0.0
FL-Next: sp=AP-4 complex subunit epsilon; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: ap-4 complex subunit epsilon-1 0.0
Putative N-terminus
uagpf_v2_unigene563 uagpf v2.0 871
AutoFact: Got1/Sft2-like vescicle transport protein [Arabidopsis thaliana] gb|ABD43012.1| At4g26550 [Arabidopsis thaliana] gb|AEE85217.1| Got1/Sft2-like vescicle transport protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein transport protein sft2 0.0
C-terminus
uagpf_v2_unigene1522 uagpf v2.0 852
AutoFact: SYS1 domain containing protein 1.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: coatomer subunit beta -1 0.0
C-terminus
uagpf_v2_unigene1604 uagpf v2.0 967
AutoFact: beta-adaptin-like protein B [Arabidopsis thaliana] sp|Q9SUS3.1|APBLB_ARATH RecName: Full=Beta-adaptin-like protein B; Short=At-bB-Ad; Short=At-betaB-Ad; AltName: Full=AP complex subunit beta-B; AltName: Full=Adaptor protein complex AP subunit beta-B; AltN 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: beta-adaptin-like protein c-like 0.0
Putative N-terminus
uagpf_v2_unigene2209 uagpf v2.0 756
AutoFact: SYS1 domain containing protein 1.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: coatomer subunit beta -1 0.0
Putative N-terminus
uagpf_v2_unigene2255 uagpf v2.0 1072
AutoFact: Putative synaptobrevin-like protein [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: vesicle-associated membrane protein 714 0.0
Putative Complete
uagpf_v2_unigene2340 uagpf v2.0 845
AutoFact: coatomer subunit beta-1 [Arabidopsis thaliana] ref|NP_001190880.1| coatomer subunit beta-1 [Arabidopsis thaliana] sp|Q9SV21.2|COPB1_ARATH RecName: Full=Coatomer subunit beta-1; AltName: Full=Beta-coat protein 1; Short=Beta-COP 1 gb|AEE85918.1| coatomer su 0.0
FL-Next: sp=Coatomer subunit beta; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: coatomer subunit beta-1 0.0
C-terminus
uagpf_v2_unigene2384 uagpf v2.0 1104
AutoFact: beta-adaptin-like protein B [Arabidopsis thaliana] sp|Q9SUS3.1|APBLB_ARATH RecName: Full=Beta-adaptin-like protein B; Short=At-bB-Ad; Short=At-betaB-Ad; AltName: Full=AP complex subunit beta-B; AltName: Full=Adaptor protein complex AP subunit beta-B; AltN 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: beta-adaptin-like protein c-like 0.0
C-terminus
uagpf_v2_unigene2704 uagpf v2.0 731
AutoFact: Synaptosomal associated protein, putative n=1 Tax=Ricinus communis RepID=B9RLS5_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: snap25 homologous protein snap33 0.0
N-terminus
uagpf_v2_unigene3468 uagpf v2.0 603
AutoFact: vacuolar protein sorting-associated protein 36 [Arabidopsis thaliana] sp|Q9FF81.1|VPS36_ARATH RecName: Full=Vacuolar protein sorting-associated protein 36; Short=AtVPS36; AltName: Full=ESCRT-II complex subunit VPS36 dbj|BAB11514.1| unnamed protein product 0.0
FL-Next: sp=Vacuolar protein sorting-associated protein 36; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: vacuolar protein sorting-associated protein 36-like 0.0
Internal
uagpf_v2_unigene3576 uagpf v2.0 757
AutoFact: Syntaxin, putative n=1 Tax=Ricinus communis RepID=B9RPA3_RICCO 0.0
Blast2go: qa- syp3 sed5p syntaxin 5-type 0.0
unknown
uagpf_v2_unigene3880 uagpf v2.0 1163
AutoFact: Coatomer subunit gamma (Fragment) n=4 Tax=rosids RepID=D7TQ06_VITVI 0.0
FL-Next: sp=Coatomer subunit gamma-2; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: coatomer subunit gamma 0.0
C-terminus
uagpf_v2_unigene4405 uagpf v2.0 2018
AutoFact: Coatomer subunit gamma (Fragment) n=4 Tax=rosids RepID=D7TQ06_VITVI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: coatomer subunit gamma 0.0
N-terminus
uagpf_v2_unigene4570 uagpf v2.0 475
AutoFact: Putative adapter protein SPIKE1 [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Oryza sativa subsp. indica (Rice). 0.0
Blast2go: protein 0.0
C-terminus
uagpf_v2_unigene4708 uagpf v2.0 777
AutoFact: Vacuolar protein sorting-associated protein VPS4, putative n=3 Tax=Spermatophyta RepID=B9SCR4_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: vacuolar sorting protein 4b 0.0
C-terminus
uagpf_v2_unigene4755 uagpf v2.0 1606
AutoFact: vacuolar protein sorting-associated protein 20-2 [Arabidopsis thaliana] sp|Q9FY89.1|VP202_ARATH RecName: Full=Vacuolar protein sorting-associated protein 20 homolog 2; Short=AtVPS20-2; AltName: Full=Charged multivesicular body protein 6 homolog 2; AltName 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: snf7 family protein 0.0
Putative Complete
uagpf_v2_unigene4846 uagpf v2.0 788
AutoFact: vesicle-associated membrane protein 725 [Arabidopsis thaliana] sp|O48850.2|VA725_ARATH RecName: Full=Vesicle-associated membrane protein 725; Short=AtVAMP725 dbj|BAC42934.1| putative synaptobrevin [Arabidopsis thaliana] gb|AAP06822.1| putative synaptobrev 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: vesicle-associated membrane 0.0
Complete
uagpf_v2_unigene4993 uagpf v2.0 403
AutoFact: golgi SNAP receptor complex member 2 [Arabidopsis thaliana] sp|Q9SJL6.1|MEM11_ARATH RecName: Full=Membrin-11; Short=AtMEMB11; AltName: Full=27 kDa Golgi SNARE protein; AltName: Full=Golgi SNAP receptor complex member 2-1 gb|AAD31575.1| putative cis-Golgi 0.0
FL-Next: sp=Membrin-11; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: golgi snap receptor complex member 2 0.0
Putative N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain