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Assembly Name: uagpf v2.0

Name: DNA-directed RNA polymerase activity

Term: GO:0003899  Help

Source: GO from Blast2go

Ontology: Molecular Function


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene1906 uagpf v2.0 388
AutoFact: DNA-directed RNA polymerase n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RNX6_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna-directed rna polymerase iii subunit rpc2 0.0
N-terminus
uagpf_v2_unigene2380 uagpf v2.0 972
AutoFact: DNA-directed RNA polymerase subunit n=1 Tax=Picea sitchensis RepID=D5AAK0_PICSI 0.0
FL-Next: sp=DNA-directed RNA polymerase subunit; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna-directed rna polymerases iii kda 0.0
Complete
uagpf_v2_unigene5130 uagpf v2.0 847
AutoFact: DNA binding / DNA-directed RNA polymerase [Arabidopsis thaliana] gb|AAK25914.1|AF360204_1 unknown protein [Arabidopsis thaliana] dbj|BAB02324.1| unnamed protein product [Arabidopsis thaliana] gb|AAK64110.1| unknown protein [Arabidopsis thaliana] gb|AEE754 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna-directed rna polymerase i subunit rpa49 0.0
N-terminus
uagpf_v2_unigene5652 uagpf v2.0 1210
AutoFact: DNA-directed RNA polymerase II subunit E [Arabidopsis thaliana] gb|AAK48978.1|AF370551_1 RNA polymerase I, II and III 24.3 kDa subunit [Arabidopsis thaliana] gb|AAL06554.1|AF412101_1 AT3g22320/MCB17_5 [Arabidopsis thaliana] gb|AAC28253.1| RNA polymerase I 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna-directed rna polymerases and iii subunit rpabc1 0.0
Complete
uagpf_v2_unigene5845 uagpf v2.0 697
AutoFact: ATP-binding cassette transporter, subfamily I, member 15, ABC component protein PpABCI15 (Fragment) n=2 Tax=Physcomitrella patens subsp. patens RepID=A9RAW0_PHYPA 0.0
FL-Next: sp=UPF0051 protein ABCI8, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: at4g04770 t4b21_16 0.0
N-terminus
uagpf_v2_unigene6061 uagpf v2.0 562
AutoFact: RNA polymerase Rpb7 N-terminal domain-containing protein [Arabidopsis thaliana] gb|AAF63141.1|AC011001_11 hypothetical protein [Arabidopsis thaliana] gb|AAL38764.1| putative RNA polymerase [Arabidopsis thaliana] gb|AAN13199.1| putative RNA polymerase [Ara 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: protein 0.0
N-terminus
uagpf_v2_unigene6381 uagpf v2.0 722
AutoFact: DNA-directed RNA polymerase (Fragment) n=1 Tax=Vitis vinifera RepID=D7TX75_VITVI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna-directed rna polymerase i subunit rpa2 0.0
Putative Complete
uagpf_v2_unigene6742 uagpf v2.0 1602
AutoFact: RNA polymerase, dimerisation [Medicago truncatula] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna-directed rna polymerase third largest subunit 0.0
Complete
uagpf_v2_unigene8613 uagpf v2.0 388
AutoFact: DNA-directed RNA polymerase (Fragment) n=10 Tax=Spermatophyta RepID=Q2TUN6_GINBI 0.0
FL-Next: sp=DNA-directed RNA polymerase II subunit RPB1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: rna polymerase ii largest subunit 0.0
Internal
uagpf_v2_unigene9381 uagpf v2.0 395
AutoFact: DNA-directed RNA polymerase (Fragment) n=1 Tax=Vitis vinifera RepID=D7TX75_VITVI 0.0
FL-Next: sp=DNA-directed RNA polymerase; Vitis vinifera (Grape). 0.0
Blast2go: dna-directed rna polymerase i subunit rpa2 0.0
Internal
uagpf_v2_unigene9383 uagpf v2.0 1041
AutoFact: DNA-directed RNA polymerase subunit n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SFI8_PHYPA 5.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna-directed rna polymerase i subunit rpa12 0.0
Complete
uagpf_v2_unigene9441 uagpf v2.0 524
AutoFact: DNA binding / DNA-directed RNA polymerase [Arabidopsis thaliana] gb|AAK25914.1|AF360204_1 unknown protein [Arabidopsis thaliana] dbj|BAB02324.1| unnamed protein product [Arabidopsis thaliana] gb|AAK64110.1| unknown protein [Arabidopsis thaliana] gb|AEE754 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna-directed rna polymerase i subunit rpa49 0.0
Internal
uagpf_v2_unigene10389 uagpf v2.0 1152
AutoFact: DNA-directed RNA polymerase (Fragment) n=1 Tax=Ginkgo biloba RepID=Q1L6W2_GINBI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna polymerase iv second largest subunit 0.0
Complete
uagpf_v2_unigene10405 uagpf v2.0 309
AutoFact: DNA-directed RNA polymerase subunit n=1 Tax=Picea sitchensis RepID=D5AAK0_PICSI 0.0
Blast2go: dna-directed rna polymerases iii kda 0.0
unknown
uagpf_v2_unigene11404 uagpf v2.0 617
AutoFact: RecName: Full=DNA-directed RNA polymerase II subunit RPB7; Short=RNA polymerase II subunit B7 gb|AAA34005.1| RNA polymerase II [Glycine max] gb|ACU13766.1| unknown [Glycine max] 0.0
FL-Next: sp=DNA-directed RNA polymerase II subunit RPB7; Glycine max (Soybean) (Glycine hispida). 0.0
Blast2go: dna-directed rna polymerase ii subunit rpb7 0.0
C-terminus
uagpf_v2_unigene11922 uagpf v2.0 583
AutoFact: 15.9 kDa subunit of RNA polymerase II n=8 Tax=core eudicotyledons RepID=O48890_ARATH 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: kda subunit of rna polymerase ii 0.0
C-terminus
uagpf_v2_unigene12931 uagpf v2.0 399
AutoFact: CTP_transf_2 domain containing protein 2.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: phosphopantetheine adenylyltransferase 0.0
N-terminus
uagpf_v2_unigene13418 uagpf v2.0 506
AutoFact: RNA polymerase Rpb7 N-terminal domain-containing protein [Arabidopsis thaliana] gb|AAF63141.1|AC011001_11 hypothetical protein [Arabidopsis thaliana] gb|AAL38764.1| putative RNA polymerase [Arabidopsis thaliana] gb|AAN13199.1| putative RNA polymerase [Ara 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: protein 0.0
C-terminus
uagpf_v2_unigene13934 uagpf v2.0 1094
AutoFact: ATP-binding cassette transporter, subfamily I, member 15, ABC component protein PpABCI15 (Fragment) n=2 Tax=Physcomitrella patens subsp. patens RepID=A9RAW0_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: at4g04770 t4b21_16 0.0
C-terminus
uagpf_v2_unigene14408 uagpf v2.0 863
AutoFact: CTP_transf_2 domain containing protein 2.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: phosphopantetheine adenylyltransferase 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain