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Assembly Name: uagpf v2.0

Name: DNA-directed RNA polymerase activity

Term: GO:0003899  Help

Source: GO from Blast2go

Ontology: Molecular Function


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene14515 uagpf v2.0 545
AutoFact: RecName: Full=DNA-directed RNA polymerase II subunit RPB7; Short=RNA polymerase II subunit B7 gb|AAA34005.1| RNA polymerase II [Glycine max] gb|ACU13766.1| unknown [Glycine max] 0.0
Blast2go: dna-directed rna polymerase ii subunit rpb7 0.0
unknown
uagpf_v2_unigene15061 uagpf v2.0 911
AutoFact: DNA-directed RNA polymerase 1B, mitochondrial n=3 Tax=Nicotiana RepID=RPO1B_TOBAC 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: t7 bacteriophage-type single subunit rna polymerase 0.0
C-terminus
uagpf_v2_unigene15103 uagpf v2.0 621
AutoFact: DNA binding / DNA-directed RNA polymerase [Arabidopsis thaliana] dbj|BAA97230.1| unnamed protein product [Arabidopsis thaliana] gb|AAQ89628.1| At5g23710 [Arabidopsis thaliana] gb|AED93201.1| DNA binding / DNA-directed RNA polymerase [Arabidopsis thaliana] 8.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna-directed rna polymerase iii subunit rpc6-like 0.0
C-terminus
uagpf_v2_unigene15301 uagpf v2.0 793
AutoFact: RecName: Full=DNA-directed RNA polymerase II subunit RPB7; Short=RNA polymerase II subunit B7 gb|AAA34005.1| RNA polymerase II [Glycine max] gb|ACU13766.1| unknown [Glycine max] 0.0
FL-Next: sp=DNA-directed RNA polymerase II subunit RPB7; Glycine max (Soybean) (Glycine hispida). 0.0
Blast2go: dna-directed rna polymerase ii subunit rpb7 0.0
N-terminus
uagpf_v2_unigene17931 uagpf v2.0 1019
AutoFact: 15.9 kDa subunit of RNA polymerase II n=8 Tax=core eudicotyledons RepID=O48890_ARATH 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: dna-directed rna polymerase ii subunit rpb4 0.0
Complete
uagpf_v2_unigene18833 uagpf v2.0 726
AutoFact: RNA polymerase n=1 Tax=Elaeis guineensis RepID=B3TLS5_ELAGV 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna-directed rna polymerases and iii kda polypeptide 0.0
C-terminus
uagpf_v2_unigene19628 uagpf v2.0 420
AutoFact: 15.9 kDa subunit of RNA polymerase II n=8 Tax=core eudicotyledons RepID=O48890_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
Blast2go: kda subunit of rna polymerase ii 0.0
N-terminus
uagpf_v2_unigene26690 uagpf v2.0 499
AutoFact: DNA-directed RNA polymerase (Fragment) n=1 Tax=Berberidopsis corallina RepID=Q1L5Z7_9MAGN 0.0
FL-Next: sp=DNA-directed RNA polymerase II subunit RPB2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: rna polymerase ii second largest subunit 0.0
Internal
uagpf_v2_unigene27291 uagpf v2.0 577
AutoFact: DNA-directed RNA polymerase n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RSV5_PHYPA 0.0
FL-Next: sp=DNA-directed RNA polymerase II subunit RPB1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna-directed rna polymerase iii subunit rpc1-like 0.0
Internal
uagpf_v2_unigene29699 uagpf v2.0 281
AutoFact: DNA-directed RNA polymerase n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RSV5_PHYPA 0.0
FL-Next: sp=DNA-directed RNA polymerase II subunit RPB1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna-directed rna polymerase iii subunit rpc1-like 0.0
Internal
uagpf_v2_unigene30937 uagpf v2.0 310
AutoFact: DNA-directed RNA polymerase n=6 Tax=core eudicotyledons RepID=B9SXC0_RICCO 0.0
FL-Next: sp=DNA-directed RNA polymerase II subunit RPB1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna-directed rna polymerase ii subunit rpb1-like 0.0
N-terminus
uagpf_v2_unigene34494 uagpf v2.0 449
AutoFact: DNA-directed RNA polymerase n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RNX6_PHYPA 0.0
FL-Next: sp=DNA-directed RNA polymerase II subunit RPB2; Solanum lycopersicum (Tomato) (Lycopersicon esculentum). 0.0
Blast2go: protein 0.0
Internal
uagpf_v2_unigene34773 uagpf v2.0 250
AutoFact: DNA-directed RNA polymerase 1B, mitochondrial n=3 Tax=Nicotiana RepID=RPO1B_TOBAC 0.0
FL-Next: sp=DNA-directed RNA polymerase 2B, chloroplastic/mitochondrial; Nicotiana tabacum (Common tobacco). 0.0
Blast2go: t7 bacteriophage-type single subunit rna polymerase 0.0
Internal
uagpf_v2_unigene39111 uagpf v2.0 230
AutoFact: DNA-directed RNA polymerase n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RNX6_PHYPA 0.0
FL-Next: sp=DNA-directed RNA polymerase II subunit RPB2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
Internal
uagpf_v2_unigene40424 uagpf v2.0 370
AutoFact: DNA-directed RNA polymerase n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RNX6_PHYPA 0.0
FL-Next: sp=DNA-directed RNA polymerase subunit beta 2; Pinus lambertiana (Sugar pine). Plastid; Chloroplast. 0.0
Blast2go: dna-directed rna polymerase iii subunit rpc2 0.0
Internal
uagpf_v2_unigene41809 uagpf v2.0 377
AutoFact: RNA polymerase sigma factor [Arabidopsis thaliana] emb|CAA77213.1| sigma-like factor [Arabidopsis thaliana] dbj|BAA78109.1| RNA polymerase sigma subunit SigE [Arabidopsis thaliana] dbj|BAB11572.1| sigma-like factor [Arabidopsis thaliana] dbj|BAH19595.1| A 0.0
Blast2go: rna polymerase sigma factor rpod-like 0.0
unknown
uagpf_v2_unigene42123 uagpf v2.0 419
AutoFact: Ubiquinone biosynthesis protein coq-8, putative n=1 Tax=Ricinus communis RepID=B9RN20_RICCO 7.9874e-44
FL-Next: tr=Ubiquinone biosynthesis protein coq-8, putative; Ricinus communis (Castor bean). 0.0
Blast2go: chaperone activity of bc1 complex- mitochondrial-like 0.0
Internal
uagpf_v2_unigene42789 uagpf v2.0 324
AutoFact: DNA-directed RNA polymerase n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RNX6_PHYPA 0.0
FL-Next: sp=DNA-directed RNA polymerase II subunit RPB2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
Internal
uagpf_v2_unigene46449 uagpf v2.0 343
AutoFact: DNA-directed RNA polymerase subunit n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SFI8_PHYPA 5.0e-39
Blast2go: dna-directed rna polymerase i subunit rpa12 0.0
unknown
uagpf_v2_unigene46893 uagpf v2.0 428
AutoFact: DNA-directed RNA polymerase (Fragment) n=2 Tax=Vitis vinifera RepID=D7TA90_VITVI 0.0
FL-Next: sp=DNA-directed RNA polymerase 2B, chloroplastic/mitochondrial; Nicotiana tabacum (Common tobacco). 0.0
Blast2go: phage-type rna polymerase 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain