Sequence
|
Assembly
|
Length (nt)
|
|
Full-Length
|
uagpf_v2_unigene2629
|
uagpf v2.0
|
1029
|
• AutoFact: DEAD-box ATP-dependent RNA helicase 6 n=6 Tax=BEP clade RepID=RH6_ORYSJ
|
0.0
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Blast2go: dead-box atp-dependent rna helicase 8-like
|
0.0
|
|
Putative N-terminus
|
uagpf_v2_unigene2652
|
uagpf v2.0
|
1113
|
• AutoFact: RNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9SKE9_RICCO
|
0.0
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Blast2go: heterogeneous nuclear ribonucleoprotein q
|
0.0
|
|
N-terminus
|
uagpf_v2_unigene2664
|
uagpf v2.0
|
649
|
• AutoFact: zinc finger CCCH domain-containing protein 63 [Arabidopsis thaliana] dbj|BAB11046.1| unnamed protein product [Arabidopsis thaliana] gb|AED96154.1| zinc finger CCCH domain-containing protein 63 [Arabidopsis thaliana]
|
0.0
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Blast2go: zinc finger ccch domain-containing protein 48
|
0.0
|
|
Putative C-terminus
|
uagpf_v2_unigene2690
|
uagpf v2.0
|
764
|
• AutoFact: Zinc finger CCCH domain-containing protein 17 n=4 Tax=Oryza sativa RepID=C3H17_ORYSJ
|
0.0
|
• Blast2go: zinc finger ccch domain-containing protein 48
|
0.0
|
|
unknown
|
uagpf_v2_unigene2711
|
uagpf v2.0
|
649
|
• AutoFact: pfam00013, KH_1, KH domain
|
8.0e-12
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Blast2go: kh domain-containing protein at4g18375-like
|
0.0
|
|
N-terminus
|
uagpf_v2_unigene3030
|
uagpf v2.0
|
1003
|
• AutoFact: Herpes_gp2 domain containing protein
|
7.0e-05
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Blast2go: zinc finger c-x8-c-x5-c-x3-h type family protein
|
0.0
|
|
Complete
|
uagpf_v2_unigene3101
|
uagpf v2.0
|
562
|
• AutoFact: methyltransferase / nucleic acid binding protein [Arabidopsis thaliana] gb|AAK25997.1|AF360287_1 unknown protein [Arabidopsis thaliana] dbj|BAB02202.1| unnamed protein product [Arabidopsis thaliana] gb|AAK93720.1| unknown protein [Arabidopsis thaliana] gb
|
0.0
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Blast2go: trna guanosine-2 -o-methyltransferase trm11 homolog
|
0.0
|
|
C-terminus
|
uagpf_v2_unigene3153
|
uagpf v2.0
|
649
|
• AutoFact: putative E3 ubiquitin-protein ligase ARI8 [Arabidopsis thaliana] sp|Q8W468.1|ARI8_ARATH RecName: Full=Probable E3 ubiquitin-protein ligase ARI8; AltName: Full=ARIADNE-like protein ARI8; AltName: Full=Protein ariadne homolog 8 gb|AAL32886.1| Unknown protei
|
0.0
|
• FL-Next: sp=Probable E3 ubiquitin-protein ligase ARI8; Arabidopsis thaliana (Mouse-ear cress).
|
0.0
|
• Blast2go: probable e3 ubiquitin-protein ligase ari7-like
|
0.0
|
|
Internal
|
uagpf_v2_unigene3204
|
uagpf v2.0
|
1417
|
• AutoFact: [R] COG0724 RNA-binding proteins (RRM domain)
|
3.0e-09
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Blast2go: rna and export factor binding
|
0.0
|
|
Putative Complete
|
uagpf_v2_unigene3228
|
uagpf v2.0
|
401
|
• AutoFact: asparaginyl-tRNA synthetase, cytoplasmic 1 [Arabidopsis thaliana] sp|Q9SW96.1|SYNC1_ARATH RecName: Full=Asparaginyl-tRNA synthetase, cytoplasmic 1; AltName: Full=Asparagine--tRNA ligase 1; Short=AsnRS 1; AltName: Full=Protein EMBRYO DEFECTIVE 2755 gb|AAD4
|
0.0
|
• Blast2go: asparaginyl-trna cytoplasmic 1-like
|
0.0
|
|
Putative coding
|
uagpf_v2_unigene3247
|
uagpf v2.0
|
608
|
• AutoFact: zinc finger-related and helicase and IBR domain-containing protein [Arabidopsis thaliana] sp|P0CE10.1|Y4102_ARATH RecName: Full=Putative uncharacterized protein At4g01020, chloroplastic; Flags: Precursor gb|AEE81967.1| zinc finger-related and helicase and
|
0.0
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Blast2go: uncharacterized protein chloroplastic-like
|
0.0
|
|
Internal
|
uagpf_v2_unigene3292
|
uagpf v2.0
|
506
|
• AutoFact: ATP-dependent RNA helicase (ISS) [Ostreococcus tauri] emb|CAL55992.1| ATP-dependent RNA helicase (ISS) [Ostreococcus tauri]
|
0.0
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Blast2go: protein
|
0.0
|
|
Putative N-terminus
|
uagpf_v2_unigene3309
|
uagpf v2.0
|
762
|
• AutoFact: putative E3 ubiquitin-protein ligase ARI8 [Arabidopsis thaliana] sp|Q8W468.1|ARI8_ARATH RecName: Full=Probable E3 ubiquitin-protein ligase ARI8; AltName: Full=ARIADNE-like protein ARI8; AltName: Full=Protein ariadne homolog 8 gb|AAL32886.1| Unknown protei
|
0.0
|
• FL-Next: sp=Probable E3 ubiquitin-protein ligase ARI8; Arabidopsis thaliana (Mouse-ear cress).
|
0.0
|
• Blast2go: protein
|
0.0
|
|
C-terminus
|
uagpf_v2_unigene3320
|
uagpf v2.0
|
411
|
• AutoFact: cell division protease ftsH-11 [Arabidopsis thaliana] sp|Q9FGM0.1|FTSHB_ARATH RecName: Full=ATP-dependent zinc metalloprotease FTSH 11, chloroplastic/mitochondrial; Short=AtFTSH11; Flags: Precursor dbj|BAB08420.1| cell division protein FtsH protease-like
|
0.0
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Blast2go: atp-dependent zinc metalloprotease ftsh chloroplastic mitochondrial-like
|
0.0
|
|
C-terminus
|
uagpf_v2_unigene3369
|
uagpf v2.0
|
280
|
• AutoFact: SAP domain-containing protein [Arabidopsis thaliana] ref|NP_001078515.1| SAP domain-containing protein [Arabidopsis thaliana] emb|CAA18754.1| putative protein [Arabidopsis thaliana] emb|CAB80631.1| putative protein [Arabidopsis thaliana] gb|AEE87103.1| SA
|
0.0
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Blast2go: sap domain-containing protein
|
0.0
|
|
Internal
|
uagpf_v2_unigene3419
|
uagpf v2.0
|
1042
|
• AutoFact: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain), putative [Oryza sativa Japonica Group] gb|ABA92375.1| RNA recognition motif family protein, expressed [Oryza sativa Japonica Group] gb|EEE51928.1| hypothetical protein OsJ_33542 [Oryza sativa Japoni
|
0.0
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Blast2go: rna recognition motif-containing protein
|
0.0
|
|
C-terminus
|
uagpf_v2_unigene3475
|
uagpf v2.0
|
454
|
• AutoFact: Unassigned protein
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Blast2go: unknown [Picea sitchensis]
|
0.0
|
|
C-terminus
|
uagpf_v2_unigene3501
|
uagpf v2.0
|
797
|
• AutoFact: putative Ras-GTPase-activating protein binding protein 1 [Oryza sativa Japonica Group] dbj|BAG91794.1| unnamed protein product [Oryza sativa Japonica Group]
|
0.0
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Blast2go: rna binding
|
0.0
|
|
C-terminus
|
uagpf_v2_unigene3524
|
uagpf v2.0
|
1266
|
• AutoFact: asparaginyl-tRNA synthetase, cytoplasmic 1 [Arabidopsis thaliana] sp|Q9SW96.1|SYNC1_ARATH RecName: Full=Asparaginyl-tRNA synthetase, cytoplasmic 1; AltName: Full=Asparagine--tRNA ligase 1; Short=AsnRS 1; AltName: Full=Protein EMBRYO DEFECTIVE 2755 gb|AAD4
|
0.0
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Blast2go: asparaginyl-trna cytoplasmic 1-like
|
0.0
|
|
C-terminus
|
uagpf_v2_unigene3775
|
uagpf v2.0
|
527
|
• AutoFact: Zinc finger CCCH domain-containing protein 18 n=4 Tax=Oryza sativa RepID=C3H18_ORYSJ
|
0.0
|
• FL-Next: sp=Zinc finger CCCH domain-containing protein 18; Oryza sativa subsp. japonica (Rice).
|
0.0
|
• Blast2go: zinc finger ccch domain-containing protein 18-like
|
0.0
|
|
C-terminus
|