Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: uagpf v2.0

Name: nucleic acid binding

Term: GO:0003676  Help

Source: GO from Blast2go

Ontology: Molecular Function


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene41777 uagpf v2.0 412
AutoFact: putative RNA helicase [Oryza sativa Japonica Group] dbj|BAD35820.1| putative RNA helicase [Oryza sativa Japonica Group] 0.0
Blast2go: deah-box nuclear pre-mrna splicing factor 0.0
unknown
uagpf_v2_unigene42314 uagpf v2.0 408
AutoFact: Histidine kinase osmosensor protein n=1 Tax=Populus trichocarpa RepID=B9GYZ6_POPTR 2.0e-17
Blast2go: histidine kinase osmosensor protein 1.71069e-19
unknown
uagpf_v2_unigene42367 uagpf v2.0 425
AutoFact: nucleic acid binding protein [Arabidopsis thaliana] ref|NP_001118640.1| nucleic acid binding protein [Arabidopsis thaliana] gb|ABF59160.1| hypothetical protein At3g15605 [Arabidopsis thaliana] gb|AEE75698.1| nucleic acid binding protein [Arabidopsis thali 1.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
uagpf_v2_unigene42577 uagpf v2.0 216
AutoFact: [KL] COG0553 Superfamily II DNA/RNA helicases, SNF2 family 2.0e-10
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: chromodomain-helicase-dna-binding protein 2-like 0.0
Internal
uagpf_v2_unigene42826 uagpf v2.0 298
AutoFact: putative U5 small nuclear ribonucleoprotein helicase [Arabidopsis thaliana] ref|NP_001185050.1| putative U5 small nuclear ribonucleoprotein helicase [Arabidopsis thaliana] gb|AAD30595.1|AC007369_5 Putative RNA helicase [Arabidopsis thaliana] gb|AEE30046.1 0.0
FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
Blast2go: u5 small nuclear ribonucleoprotein 200 kda helicase 0.0
Internal
uagpf_v2_unigene42896 uagpf v2.0 149
AutoFact: nuclear assembly factor 1 [Arabidopsis thaliana] gb|AAF86533.1|AC002560_26 F21B7.15 [Arabidopsis thaliana] gb|AEE27583.1| nuclear assembly factor 1 [Arabidopsis thaliana] 8.0e-38
Blast2go: protein 4.18988e-43
unknown
uagpf_v2_unigene42990 uagpf v2.0 407
AutoFact: DNA topoisomerase (Fragment) n=1 Tax=Vitis vinifera RepID=D7U9K8_VITVI 9.0e-31
FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
Blast2go: dna topoisomerase 3-beta-1-like 1.45692e-32
Internal
uagpf_v2_unigene43141 uagpf v2.0 243
AutoFact: Zinc finger protein, putative n=1 Tax=Ricinus communis RepID=B9RZN5_RICCO 2.00386e-43
Blast2go: protein 0.0
unknown
uagpf_v2_unigene43142 uagpf v2.0 215
AutoFact: MEE49; MEE49 (maternal effect embryo arrest 49) 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ribosome production factor 0.0
Internal
uagpf_v2_unigene43167 uagpf v2.0 307
AutoFact: DNA topoisomerase n=1 Tax=Sorghum bicolor RepID=C5WWW3_SORBI 3.0e-37
FL-Next: sp=DNA topoisomerase; Sorghum bicolor (Sorghum) (Sorghum vulgare). 0.0
Blast2go: dna topoisomerase iii 4.2039e-44
Internal
uagpf_v2_unigene43248 uagpf v2.0 257
AutoFact: putative CCR4-associated factor 1-7 [Arabidopsis thaliana] sp|Q9SKZ2.2|CAF1G_ARATH RecName: Full=Probable CCR4-associated factor 1 homolog 7 gb|AAK93623.1| putative CCR4-associated factor [Arabidopsis thaliana] gb|AAD15397.2| putative CCR4-associated fact 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ccr4-associated factor 0.0
N-terminus
uagpf_v2_unigene43866 uagpf v2.0 357
AutoFact: Signal recognition particle subunit srp72, putative n=1 Tax=Ricinus communis RepID=B9RMK3_RICCO 0.0
Blast2go: signal recognition particle subunit srp72 0.0
Coding
uagpf_v2_unigene44747 uagpf v2.0 218
AutoFact: putative methylase [Arabidopsis thaliana] gb|AAO64787.1| At4g28830 [Arabidopsis thaliana] dbj|BAE99501.1| hypothetical protein [Arabidopsis thaliana] gb|AEE85551.1| putative methylase [Arabidopsis thaliana] 0.0
FL-Next: tr=At4g28830; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: methyltransferase-like protein 0.0
Putative C-terminus
uagpf_v2_unigene45146 uagpf v2.0 184
AutoFact: MEE49; MEE49 (maternal effect embryo arrest 49) 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ribosome production factor 0.0
Internal
uagpf_v2_unigene45225 uagpf v2.0 424
AutoFact: Calmodulin binding protein, putative n=1 Tax=Ricinus communis RepID=B9RJ06_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: iq domain-containing protein 0.0
Internal
uagpf_v2_unigene45292 uagpf v2.0 359
AutoFact: C2H2-like zinc finger protein [Arabidopsis thaliana] gb|AAL91183.1| unknown protein [Arabidopsis thaliana] gb|AAN15705.1| unknown protein [Arabidopsis thaliana] gb|AEE85082.1| C2H2-like zinc finger protein [Arabidopsis thaliana] 1.0e-07
Blast2go: c2h2-like zinc finger protein 1.17402e-07
Putative coding
uagpf_v2_unigene45310 uagpf v2.0 351
AutoFact: DEAD-box ATP-dependent RNA helicase 38 [Arabidopsis thaliana] sp|Q93ZG7.2|RH38_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 38; AltName: Full=Low expression of osmotically-responsive genes 4 protein; AltName: Full=Protein CRYOPHYTE emb|CAB64214 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dead-box atp-dependent rna helicase 38-like 0.0
N-terminus
uagpf_v2_unigene45679 uagpf v2.0 352
AutoFact: putative DEAD/H box polypeptide 36 protein [Oryza sativa Japonica Group] 1.0e-37
FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: atp-dependent rna helicase a-like protein 9.80909e-45
Internal
uagpf_v2_unigene45704 uagpf v2.0 322
AutoFact: G patch domain-containing protein 1 [Arabidopsis thaliana] dbj|BAC42755.1| unknown protein [Arabidopsis thaliana] gb|AAP40415.1| unknown protein [Arabidopsis thaliana] gb|AED93116.1| G patch domain-containing protein 1 [Arabidopsis thaliana] 2.0e-28
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: g patch domain-containing protein 1 2.51327e-34
Internal
uagpf_v2_unigene46449 uagpf v2.0 343
AutoFact: DNA-directed RNA polymerase subunit n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SFI8_PHYPA 5.0e-39
Blast2go: dna-directed rna polymerase i subunit rpa12 0.0
unknown

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain