Sustainpine_db
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Assembly Name: uagpf v2.0

Name: nucleic acid binding

Term: GO:0003676  Help

Source: GO from Blast2go

Ontology: Molecular Function


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene37026 uagpf v2.0 377
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: protein 0.0
Internal
uagpf_v2_unigene37118 uagpf v2.0 396
AutoFact: Herpes_gp2 domain containing protein 7.0e-05
Blast2go: zinc finger c-x8-c-x5-c-x3-h type family protein 0.0
Coding
uagpf_v2_unigene37125 uagpf v2.0 548
AutoFact: Dimer_Tnp_hAT domain containing protein 2.0e-05
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: hat family dimerization domain-containing protein 0.0
Internal
uagpf_v2_unigene37186 uagpf v2.0 362
AutoFact: Os02g0513700 protein n=1 Tax=Oryza sativa Japonica Group RepID=Q0E0X9_ORYSJ 2.0e-19
FL-Next: tr=Putative uncharacterized protein; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: hat dimerisation domain-containing 2.94474e-29
Internal
uagpf_v2_unigene37189 uagpf v2.0 193
AutoFact: Pre-mRNA processing ribonucleoprotein, binding region; NOSIC [Medicago truncatula] 0.0
Blast2go: u4 u6 small nuclear ribonucleoprotein prp31-like 0.0
unknown
uagpf_v2_unigene37405 uagpf v2.0 359
AutoFact: DEAD-box ATP-dependent RNA helicase 36 [Arabidopsis thaliana] sp|Q9SA27.1|RH36_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 36 gb|AAD34681.1|AC006341_9 Similar to gb|L13612 DEAD-box protein (dbp45A) from Drosophila melanogaster and is a member 0.0
Blast2go: dead-box atp-dependent rna helicase 36-like 0.0
unknown
uagpf_v2_unigene37493 uagpf v2.0 510
AutoFact: DEAD-box ATP-dependent RNA helicase 21 [Arabidopsis thaliana] sp|P93008.1|RH21_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 21 gb|AAC69128.1| putative U5 small nuclear ribonucleoprotein, an RNA helicase [Arabidopsis thaliana] gb|AAL38370.1| put 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dead-box atp-dependent rna helicase 0.0
N-terminus
uagpf_v2_unigene37607 uagpf v2.0 468
AutoFact: PREDICTED: similar to TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor isoform 6 [Canis familiaris] 1.0e-07
Blast2go: protein 4.582e-37
Coding
uagpf_v2_unigene37701 uagpf v2.0 461
AutoFact: RNA binding (RRM/RBD/RNP motifs) family protein [Arabidopsis thaliana] gb|AEE75227.1| RNA binding (RRM/RBD/RNP motifs) family protein [Arabidopsis thaliana] 1.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: polyadenylate-binding protein 2-a 0.0
Internal
uagpf_v2_unigene38100 uagpf v2.0 301
AutoFact: RecName: Full=DEAD-box ATP-dependent RNA helicase 8 dbj|BAD25226.1| putative RNA helicase [Oryza sativa Japonica Group] dbj|BAG92832.1| unnamed protein product [Oryza sativa Japonica Group] gb|EEE57460.1| hypothetical protein OsJ_07688 [Oryza sativa Japon 0.0
Blast2go: dead-box atp-dependent rna helicase 8-like 0.0
unknown
uagpf_v2_unigene38200 uagpf v2.0 457
AutoFact: DNAJ heat shock N-terminal domain-containing protein [Arabidopsis thaliana] ref|NP_001031930.1| DNAJ heat shock N-terminal domain-containing protein [Arabidopsis thaliana] gb|AAM91576.1| putative protein [Arabidopsis thaliana] gb|AAP13437.1| At5g23590 [Ar 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dnaj heat shock n-terminal domain-containing protein 0.0
N-terminus
uagpf_v2_unigene38257 uagpf v2.0 175
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: unknown [Picea sitchensis] 0.0
Internal
uagpf_v2_unigene38437 uagpf v2.0 612
AutoFact: tRNA intron endonuclease [Arabidopsis thaliana] dbj|BAA88628.1| tRNA intron endonuclease [Arabidopsis thaliana] 5.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: trna intron endonuclease 0.0
C-terminus
uagpf_v2_unigene38590 uagpf v2.0 493
AutoFact: [L] COG4581 Superfamily II RNA helicase 1.96182e-44
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: superkiller viralicidic activity 2-like 2-like 0.0
Internal
uagpf_v2_unigene38821 uagpf v2.0 328
AutoFact: putative cell division control protein [Arabidopsis thaliana] 5.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cell division control protein 1.28344e-38
Putative N-terminus
uagpf_v2_unigene38895 uagpf v2.0 333
AutoFact: Alanyl-tRNA synthetase n=4 Tax=Arabidopsis RepID=SYA_ARATH 0.0
FL-Next: Isoform Cytoplasmic of Alanyl-tRNA synthetase OS=Arabidopsis thaliana GN=ALATS 0.0
Blast2go: alanyl-trna synthetase 0.0
Internal
uagpf_v2_unigene38957 uagpf v2.0 380
AutoFact: DNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9S9Q9_RICCO 0.0
Blast2go: agenet domain-containing protein bromo-adjacent homology domain-containing protein 0.0
unknown
uagpf_v2_unigene39105 uagpf v2.0 512
AutoFact: endonuclease 4 [Arabidopsis thaliana] gb|AEE84476.1| endonuclease 4 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nuclease s1 0.0
Putative N-terminus
uagpf_v2_unigene39229 uagpf v2.0 297
AutoFact: TBP-associated factor 4 [Arabidopsis thaliana] gb|AAR21620.1| TATA-binding protein associated factor 4b [Arabidopsis thaliana] dbj|BAF01312.1| hypothetical protein [Arabidopsis thaliana] gb|AED94913.1| TBP-associated factor 4 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: transcription initiation 0.0
Internal
uagpf_v2_unigene39244 uagpf v2.0 365
AutoFact: [L] COG0816 Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) 5.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain