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Assembly Name: uagpf v2.0

Name: nucleic acid binding

Term: GO:0003676  Help

Source: GO from Blast2go

Ontology: Molecular Function

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
uagpf_v2_unigene34904 uagpf v2.0 279
• AutoFact: Dead box ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9SW84_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: dead-box atp-dependent rna helicase 42-like 0.0
Internal
uagpf_v2_unigene35221 uagpf v2.0 264
• AutoFact: nuclear assembly factor 1 [Arabidopsis thaliana] gb|AAF86533.1|AC002560_26 F21B7.15 [Arabidopsis thaliana] gb|AEE27583.1| nuclear assembly factor 1 [Arabidopsis thaliana] 8.0e-38
• Blast2go: protein 4.18988e-43
unknown
uagpf_v2_unigene35577 uagpf v2.0 299
• AutoFact: putative Helicase SKI2W [Oryza sativa Japonica Group] 0.0
• Blast2go: protein 0.0
unknown
uagpf_v2_unigene35608 uagpf v2.0 285
• AutoFact: DEAD-box ATP-dependent RNA helicase 6 n=6 Tax=BEP clade RepID=RH6_ORYSJ 0.0
• Blast2go: dead-box atp-dependent rna helicase 8-like 0.0
unknown
uagpf_v2_unigene35630 uagpf v2.0 216
• AutoFact: Zinc finger CCCH domain-containing protein 17 n=4 Tax=Oryza sativa RepID=C3H17_ORYSJ 0.0
• Blast2go: zinc finger ccch domain-containing protein 48 0.0
unknown
uagpf_v2_unigene35889 uagpf v2.0 232
• AutoFact: putative CCR4-associated factor 1-7 [Arabidopsis thaliana] sp|Q9SKZ2.2|CAF1G_ARATH RecName: Full=Probable CCR4-associated factor 1 homolog 7 gb|AAK93623.1| putative CCR4-associated factor [Arabidopsis thaliana] gb|AAD15397.2| putative CCR4-associated fact 0.0
• Blast2go: ccr4-associated factor 0.0
unknown
uagpf_v2_unigene35937 uagpf v2.0 325
• AutoFact: Integrase core domain containing protein n=1 Tax=Asparagus officinalis RepID=Q2AA43_ASPOF 0.0
• FL-Next: tr=Putative uncharacterized protein; Asparagus officinalis (Garden asparagus). 0.0
• Blast2go: gag-pol polyprotein 0.0
Internal
uagpf_v2_unigene36098 uagpf v2.0 577
• AutoFact: pfam01612, DNA_pol_A_exo1, 3'-5' exonuclease 1.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: werner syndrome-like exonuclease-like 0.0
C-terminus
uagpf_v2_unigene36155 uagpf v2.0 669
• AutoFact: RNA recognition motif-containing protein [Arabidopsis thaliana] ref|NP_849832.1| RNA recognition motif-containing protein [Arabidopsis thaliana] gb|AAB71977.1| putative RNA-binding protein [Arabidopsis thaliana] gb|AAM65738.1| RNA binding protein, putativ 4.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: rna recognition motif-containing protein 2.8026e-45
N-terminus
uagpf_v2_unigene36178 uagpf v2.0 773
• AutoFact: RNA-binding protein with multiple splicing, putative n=1 Tax=Ricinus communis RepID=B9SG87_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: cell wall integrity protein scw1 0.0
N-terminus
uagpf_v2_unigene36231 uagpf v2.0 648
• AutoFact: putative E3 ubiquitin-protein ligase ARI8 [Arabidopsis thaliana] sp|Q8W468.1|ARI8_ARATH RecName: Full=Probable E3 ubiquitin-protein ligase ARI8; AltName: Full=ARIADNE-like protein ARI8; AltName: Full=Protein ariadne homolog 8 gb|AAL32886.1| Unknown protei 0.0
• Blast2go: probable e3 ubiquitin-protein ligase ari7-like 0.0
unknown
uagpf_v2_unigene36302 uagpf v2.0 565
• AutoFact: Methionine aminopeptidase n=1 Tax=Picea sitchensis RepID=D5AE22_PICSI 0.0
• Blast2go: methionine aminopeptidase 1a 0.0
unknown
uagpf_v2_unigene36440 uagpf v2.0 543
• AutoFact: DEAD-box ATP-dependent RNA helicase 21 [Arabidopsis thaliana] sp|P93008.1|RH21_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 21 gb|AAC69128.1| putative U5 small nuclear ribonucleoprotein, an RNA helicase [Arabidopsis thaliana] gb|AAL38370.1| put 0.0
• Blast2go: dead-box atp-dependent rna helicase 0.0
unknown
uagpf_v2_unigene36448 uagpf v2.0 392
• AutoFact: DEAD-box ATP-dependent RNA helicase 20 [Arabidopsis thaliana] sp|Q9C718.1|RH20_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 20 gb|AAG50841.1|AC073944_8 ethylene-responsive RNA helicase, putative [Arabidopsis thaliana] gb|AAL32823.1| Unknown pro 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: dead-box atp-dependent rna helicase 0.0
C-terminus
uagpf_v2_unigene36472 uagpf v2.0 334
• AutoFact: Herpes_gp2 domain containing protein 7.0e-05
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: zinc finger c-x8-c-x5-c-x3-h type family protein 0.0
Complete
uagpf_v2_unigene36545 uagpf v2.0 629
• AutoFact: GCN5-related N-acetyltransferase; BRCT [Medicago truncatula] 0.0
• FL-Next: tr=Putative uncharacterized protein; Oryza sativa subsp. japonica (Rice). 0.0
• Blast2go: mediator of dna damage checkpoint protein 0.0
C-terminus
uagpf_v2_unigene36760 uagpf v2.0 475
• AutoFact: ATP-dependent DNA helicase Q-like 2 [Arabidopsis thaliana] sp|Q9FT73.1|RQL2_ARATH RecName: Full=ATP-dependent DNA helicase Q-like 2; AltName: Full=RecQ-like protein 2; Short=AtRecQ2; Short=AtRecQl2 emb|CAC14866.1| DNA Helicase [Arabidopsis thaliana] gb|AE 3.99931e-42
• FL-Next: sp=ATP-dependent DNA helicase Q-like 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: atp-dependent dna helicase q-like 2-like 0.0
Putative N-terminus
uagpf_v2_unigene36924 uagpf v2.0 409
• AutoFact: KH_1 domain containing protein 1.0e-07
• FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
• Blast2go: protein 2.80546e-24
Internal
uagpf_v2_unigene36979 uagpf v2.0 459
• AutoFact: RecName: Full=DEAD-box ATP-dependent RNA helicase 13 dbj|BAA95778.1| ATP-dependent RNA helicase [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: dead-box atp-dependent rna helicase 13 0.0
Putative Complete
uagpf_v2_unigene37019 uagpf v2.0 462
• AutoFact: putative E3 ubiquitin-protein ligase ARI8 [Arabidopsis thaliana] sp|Q8W468.1|ARI8_ARATH RecName: Full=Probable E3 ubiquitin-protein ligase ARI8; AltName: Full=ARIADNE-like protein ARI8; AltName: Full=Protein ariadne homolog 8 gb|AAL32886.1| Unknown protei 0.0
• FL-Next: sp=Probable E3 ubiquitin-protein ligase ARI7; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: probable e3 ubiquitin-protein ligase ari7-like 0.0
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain