Sustainpine_db
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Assembly Name: uagpf v2.0

Name: nucleic acid binding

Term: GO:0003676  Help

Source: GO from Blast2go

Ontology: Molecular Function


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene29672 uagpf v2.0 368
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_21.assembly12x (Fragment) n=3 Tax=Vitis vinifera RepID=D7SM13_VITVI 0.0
Blast2go: rna binding 0.0
Coding
uagpf_v2_unigene30097 uagpf v2.0 516
AutoFact: RecName: Full=DEAD-box ATP-dependent RNA helicase 8 dbj|BAD25226.1| putative RNA helicase [Oryza sativa Japonica Group] dbj|BAG92832.1| unnamed protein product [Oryza sativa Japonica Group] gb|EEE57460.1| hypothetical protein OsJ_07688 [Oryza sativa Japon 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dead-box atp-dependent rna helicase 8-like 0.0
Internal
uagpf_v2_unigene30160 uagpf v2.0 371
AutoFact: Kinesin-like protein NACK1 n=1 Tax=Nicotiana tabacum RepID=Q8S950_TOBAC 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: kinesin-like protein 0.0
Internal
uagpf_v2_unigene30171 uagpf v2.0 412
AutoFact: RNA recognition motif-containing protein [Arabidopsis thaliana] dbj|BAH20130.1| AT5G46840 [Arabidopsis thaliana] gb|AED95433.1| RNA recognition motif-containing protein [Arabidopsis thaliana] 0.0
Blast2go: rna recognition motif-containing protein 0.0
unknown
uagpf_v2_unigene30357 uagpf v2.0 567
AutoFact: DEAD-box ATP-dependent RNA helicase 52B n=3 Tax=Oryza sativa RepID=RH52B_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
uagpf_v2_unigene30364 uagpf v2.0 453
AutoFact: zinc finger CCCH domain-containing protein 20 [Arabidopsis thaliana] sp|O82199.1|C3H20_ARATH RecName: Full=Zinc finger CCCH domain-containing protein 20; Short=AtC3H20 gb|AAC62135.1| putative CCCH-type zinc finger protein [Arabidopsis thaliana] gb|AAM6084 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ccch-type zinc finger protein 0.0
Internal
uagpf_v2_unigene30436 uagpf v2.0 411
AutoFact: methyltransferase / nucleic acid binding protein [Arabidopsis thaliana] gb|AAK25997.1|AF360287_1 unknown protein [Arabidopsis thaliana] dbj|BAB02202.1| unnamed protein product [Arabidopsis thaliana] gb|AAK93720.1| unknown protein [Arabidopsis thaliana] gb 0.0
FL-Next: tr=Predicted protein; Hordeum vulgare var. distichum (Two-rowed barley). 0.0
Blast2go: trna guanosine-2 -o-methyltransferase trm11 homolog 0.0
N-terminus
uagpf_v2_unigene30845 uagpf v2.0 381
AutoFact: heterogeneous nuclear ribonucleoprotein R [Gallus gallus] ref|XP_003212536.1| PREDICTED: heterogeneous nuclear ribonucleoprotein R-like [Meleagris gallopavo] 4.0e-19
FL-Next: tr=Putative uncharacterized protein Sb08g019140; Sorghum bicolor (Sorghum) (Sorghum vulgare). 0.0
Blast2go: heterogeneous nuclear ribonucleoprotein r 0.0
Internal
uagpf_v2_unigene30853 uagpf v2.0 355
AutoFact: putative E3 ubiquitin-protein ligase ARI8 [Arabidopsis thaliana] sp|Q8W468.1|ARI8_ARATH RecName: Full=Probable E3 ubiquitin-protein ligase ARI8; AltName: Full=ARIADNE-like protein ARI8; AltName: Full=Protein ariadne homolog 8 gb|AAL32886.1| Unknown protei 0.0
FL-Next: sp=Probable E3 ubiquitin-protein ligase ARI8; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: probable e3 ubiquitin-protein ligase ari7-like 0.0
Internal
uagpf_v2_unigene30863 uagpf v2.0 369
AutoFact: Argonaute/Zwille-like protein n=2 Tax=Picea RepID=Q4PLA9_PICGL 0.0
FL-Next: tr=Argonaute/Zwille-like protein; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: argonaute protein group 0.0
Internal
uagpf_v2_unigene30999 uagpf v2.0 421
AutoFact: zinc finger CCCH domain-containing protein 20 [Arabidopsis thaliana] sp|O82199.1|C3H20_ARATH RecName: Full=Zinc finger CCCH domain-containing protein 20; Short=AtC3H20 gb|AAC62135.1| putative CCCH-type zinc finger protein [Arabidopsis thaliana] gb|AAM6084 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ccch-type zinc finger protein 0.0
N-terminus
uagpf_v2_unigene31022 uagpf v2.0 510
AutoFact: Dead box ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9SW84_RICCO 0.0
FL-Next: sp=DEAD-box ATP-dependent RNA helicase 42; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dead-box atp-dependent rna helicase 42-like 0.0
C-terminus
uagpf_v2_unigene31046 uagpf v2.0 409
AutoFact: Lysyl-tRNA synthetase n=1 Tax=Oryza sativa Japonica Group RepID=Q6K1T2_ORYSJ 0.0
FL-Next: sp=Lysyl-tRNA synthetase; Solanum lycopersicum (Tomato) (Lycopersicon esculentum). 0.0
Blast2go: lysyl-trna synthetase 0.0
C-terminus
uagpf_v2_unigene31117 uagpf v2.0 406
AutoFact: Zinc finger protein, putative n=1 Tax=Ricinus communis RepID=B9RZN5_RICCO 2.00386e-43
Blast2go: protein 0.0
unknown
uagpf_v2_unigene31159 uagpf v2.0 537
AutoFact: DUF659 domain containing protein 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: uncharacterized protein loc100852591 0.0
Internal
uagpf_v2_unigene31371 uagpf v2.0 703
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
uagpf_v2_unigene31373 uagpf v2.0 936
AutoFact: Protein terminal ear1 homolog n=2 Tax=Oryza sativa RepID=EAR1_ORYSJ 9.80909e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: terminal ear1 2.38221e-44
C-terminus
uagpf_v2_unigene31415 uagpf v2.0 745
AutoFact: DEAD-box ATP-dependent RNA helicase 52B n=3 Tax=Oryza sativa RepID=RH52B_ORYSJ 0.0
Blast2go: protein 0.0
unknown
uagpf_v2_unigene31480 uagpf v2.0 521
AutoFact: Zinc finger protein, putative n=1 Tax=Ricinus communis RepID=B9RBH0_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: zinc finger protein 511 0.0
Internal
uagpf_v2_unigene31484 uagpf v2.0 350
AutoFact: nucleic acid binding / methyltransferase [Arabidopsis thaliana] gb|AAL25534.1| AT3g58470/F14P22_60 [Arabidopsis thaliana] gb|AAM91470.1| AT3g58470/F14P22_60 [Arabidopsis thaliana] gb|AEE79786.1| nucleic acid binding / methyltransferase [Arabidopsis thalia 2.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: n -adenine-specific dna methyltransferase 2-like 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain