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Assembly Name: uagpf v2.0

Name: transcription, DNA-dependent

Term: GO:0006351  Help

Source: GO from Blast2go

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene45647 uagpf v2.0 430
AutoFact: WRKY7-superfamily of TFs having WRKY and zinc finger domains n=1 Tax=Zea mays RepID=B6T167_MAIZE 6.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: wrky7 - superfamily of tfs having wrky and zinc finger domains 1.08841e-33
Putative Complete
uagpf_v2_unigene46449 uagpf v2.0 343
AutoFact: DNA-directed RNA polymerase subunit n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SFI8_PHYPA 5.0e-39
Blast2go: dna-directed rna polymerase i subunit rpa12 0.0
unknown
uagpf_v2_unigene46528 uagpf v2.0 337
AutoFact: Ethylene-insensitive 3d n=2 Tax=Populus trichocarpa RepID=B9HK87_POPTR 6.0e-38
FL-Next: sp=Protein ETHYLENE INSENSITIVE 3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein ethylene insensitive 3-like 4.2039e-45
Internal
uagpf_v2_unigene46709 uagpf v2.0 262
AutoFact: putative AP2 domain transcription factor [Arabidopsis thaliana] 0.0
FL-Next: tr=AINTEGUMENTA-like protein; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
Blast2go: ap2-like ethylene-responsive transcription factor 0.0
Internal
uagpf_v2_unigene46713 uagpf v2.0 144
AutoFact: Actin related protein n=2 Tax=Malpighiales RepID=B9I2R4_POPTR 0.0
Blast2go: actin-related protein 0.0
unknown
uagpf_v2_unigene46733 uagpf v2.0 338
AutoFact: AP2 domain class transcription factor n=1 Tax=Malus x domestica RepID=D5L140_MALDO 1.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: tiny transcription factor 0.0
Internal
uagpf_v2_unigene46893 uagpf v2.0 428
AutoFact: DNA-directed RNA polymerase (Fragment) n=2 Tax=Vitis vinifera RepID=D7TA90_VITVI 0.0
FL-Next: sp=DNA-directed RNA polymerase 2B, chloroplastic/mitochondrial; Nicotiana tabacum (Common tobacco). 0.0
Blast2go: phage-type rna polymerase 0.0
Internal
uagpf_v2_unigene48928 uagpf v2.0 283
AutoFact: NAM-like protein [Arabidopsis thaliana] gb|AAN15611.1| NAM-like protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nac domain ipr003441 0.0
N-terminus
uagpf_v2_unigene49807 uagpf v2.0 654
AutoFact: SCL domain class transcription factor n=1 Tax=Malus x domestica RepID=D9ZJB4_MALDO 0.0
FL-Next: tr=Short-root; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Blast2go: nodulation signaling pathway 1 protein 0.0
C-terminus
uagpf_v2_unigene49932 uagpf v2.0 551
AutoFact: 4,5-DOPA dioxygenase extradiol-like protein [Arabidopsis thaliana] sp|Q949R4.1|DIOXL_ARATH RecName: Full=4,5-DOPA dioxygenase extradiol-like protein gb|AAK93625.1| unknown protein [Arabidopsis thaliana] gb|AAM51245.1| unknown protein [Arabidopsis thaliana 4.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dopa dioxygenase extradiol-like protein 2.83173e-12
Putative C-terminus
uagpf_v2_unigene50338 uagpf v2.0 404
AutoFact: GATA transcription factor, putative n=1 Tax=Ricinus communis RepID=B9RQG2_RICCO 0.0
Blast2go: protein 0.0
unknown
uagpf_v2_unigene50844 uagpf v2.0 506
AutoFact: GRAS family transcription factor n=1 Tax=Populus trichocarpa RepID=B9GPD0_POPTR 0.0
FL-Next: tr=Putative uncharacterized protein; Ricinus communis (Castor bean). 0.0
Blast2go: gras family transcription factor 0.0
Internal
uagpf_v2_unigene50857 uagpf v2.0 258
AutoFact: Zinc finger protein, putative n=1 Tax=Ricinus communis RepID=B9SC24_RICCO 0.0
Blast2go: protein 0.0
Coding
uagpf_v2_unigene51187 uagpf v2.0 483
AutoFact: Actin related protein n=2 Tax=Malpighiales RepID=B9I2R4_POPTR 0.0
Blast2go: actin-related protein 0.0
unknown
uagpf_v2_unigene51397 uagpf v2.0 464
AutoFact: Putative type-b response regulator (Sensor histidine kinase) n=1 Tax=Malus x domestica RepID=E4Z8Q8_MALDO 8.00001e-41
Blast2go: two-component response regulator arr2-like 1.00893e-43
unknown
uagpf_v2_unigene51667 uagpf v2.0 230
AutoFact: DNA-directed RNA polymerase (Fragment) n=1 Tax=Vitis vinifera RepID=D7TX75_VITVI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna-directed rna polymerase i subunit rpa2 0.0
Internal
uagpf_v2_unigene51719 uagpf v2.0 273
AutoFact: CTP_transf_2 domain containing protein 2.0e-09
Blast2go: phosphopantetheine adenylyltransferase 0.0
unknown
uagpf_v2_unigene51944 uagpf v2.0 465
AutoFact: 15.9 kDa subunit of RNA polymerase II n=8 Tax=core eudicotyledons RepID=O48890_ARATH 0.0
FL-Next: tr=15.9 kDa subunit of RNA polymerase II; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: kda subunit of rna polymerase ii 0.0
C-terminus
uagpf_v2_unigene52702 uagpf v2.0 429
AutoFact: transcription factor (E2F) [Chenopodium rubrum] 0.0
Blast2go: transcription factor e2f 0.0
unknown
uagpf_v2_unigene52976 uagpf v2.0 246
AutoFact: 15.9 kDa subunit of RNA polymerase II n=8 Tax=core eudicotyledons RepID=O48890_ARATH 0.0
Blast2go: kda subunit of rna polymerase ii 0.0
unknown

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain