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Assembly Name: uagpf v2.0

Name: transcription, DNA-dependent

Term: GO:0006351  Help

Source: GO from Blast2go

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene35746 uagpf v2.0 315
AutoFact: C2H2-type zinc finger protein, putative n=1 Tax=Arabidopsis thaliana RepID=Q9C7G8_ARATH 2.0e-12
FL-Next: tr=At1g72050; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: transcription factor iiia 1.2588e-13
N-terminus
uagpf_v2_unigene36156 uagpf v2.0 463
AutoFact: AUX/IAA protein n=4 Tax=Solanum RepID=Q45UB0_SOLLC 0.0
Blast2go: aux iaa protein 0.0
unknown
uagpf_v2_unigene36219 uagpf v2.0 367
AutoFact: transcription factor DP1 [Populus tremula x Populus tremuloides] gb|AAP73785.1| DP1 [Populus tremula x Populus tremuloides] 5.99994e-41
Blast2go: transcription factor e2 dimerization partner protein 0.0
unknown
uagpf_v2_unigene36719 uagpf v2.0 791
AutoFact: Bel1 homeotic protein, putative n=1 Tax=Ricinus communis RepID=B9SDI4_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: bel1 homeotic 0.0
C-terminus
uagpf_v2_unigene37187 uagpf v2.0 536
AutoFact: Bel1 homeotic protein, putative n=1 Tax=Ricinus communis RepID=B9SDI4_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein BLH1-2; Selaginella moellendorffii (Spikemoss). 0.0
Blast2go: bel1 homeotic 0.0
Internal
uagpf_v2_unigene37888 uagpf v2.0 392
AutoFact: WRKY transcription factor PmWRKY108 (Fragment) n=2 Tax=Pinus monticola RepID=E6Y3E0_PINMO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: wrky transcription factor 0.0
Putative C-terminus
uagpf_v2_unigene37920 uagpf v2.0 492
AutoFact: DNA-directed RNA polymerase n=1 Tax=Ricinus communis RepID=B9RC12_RICCO 2.0e-23
FL-Next: sp=DNA-directed RNA polymerase D subunit 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: nuclear rna polymerase d1a 2.40036e-26
Internal
uagpf_v2_unigene38141 uagpf v2.0 266
AutoFact: sequence-specific DNA binding transcription factor [Arabidopsis thaliana] gb|AAM13041.1| unknown protein [Arabidopsis thaliana] gb|AAO30091.1| unknown protein [Arabidopsis thaliana] gb|AEE76088.1| sequence-specific DNA binding transcription factor [Arabid 0.0
Blast2go: dna binding 0.0
unknown
uagpf_v2_unigene38247 uagpf v2.0 264
AutoFact: TPA_inf: class IV HD-Zip protein HDZ41 [Physcomitrella patens] 0.0
FL-Next: tr=Homeodomain protein HB2; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: homeodomain protein 0.0
Internal
uagpf_v2_unigene38307 uagpf v2.0 433
AutoFact: transcription factor (E2F) [Chenopodium rubrum] 0.0
Blast2go: transcription factor e2f 0.0
unknown
uagpf_v2_unigene38370 uagpf v2.0 367
AutoFact: ketose-bisphosphate aldolase class-II-like protein [Arabidopsis thaliana] gb|AAL60010.1| unknown protein [Arabidopsis thaliana] gb|AAM91809.1| unknown protein [Arabidopsis thaliana] gb|AEE29694.1| ketose-bisphosphate aldolase class-II-like protein [Arabid 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: ketose-bisphosphate aldolase class-ii-like protein 0.0
Internal
uagpf_v2_unigene39230 uagpf v2.0 423
AutoFact: Actin related protein n=2 Tax=Malpighiales RepID=B9I2R4_POPTR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: actin-related protein 0.0
Internal
uagpf_v2_unigene40014 uagpf v2.0 379
AutoFact: HLH domain containing protein 4.0e-13
FL-Next: sp=Transcription factor BIM2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: transcription factor bim1 0.0
Internal
uagpf_v2_unigene40023 uagpf v2.0 466
AutoFact: DNA binding protein GT-1 n=1 Tax=Brassica rapa RepID=A8IXS2_BRACM 4.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna binding protein gt-1 0.0
N-terminus
uagpf_v2_unigene40393 uagpf v2.0 385
AutoFact: WRKY DNA-binding protein [Nicotiana tabacum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: probable wrky transcription factor 2-like 0.0
Internal
uagpf_v2_unigene40862 uagpf v2.0 456
AutoFact: ketose-bisphosphate aldolase class-II-like protein [Arabidopsis thaliana] gb|AAL60010.1| unknown protein [Arabidopsis thaliana] gb|AAM91809.1| unknown protein [Arabidopsis thaliana] gb|AEE29694.1| ketose-bisphosphate aldolase class-II-like protein [Arabid 0.0
Blast2go: ketose-bisphosphate aldolase class-ii-like protein 0.0
Coding
uagpf_v2_unigene41272 uagpf v2.0 383
AutoFact: putative WRKY transcription factor 30 [Vitis aestivalis] 2.0e-23
Blast2go: wrky transcription factor 55-like 9.87898e-28
Coding
uagpf_v2_unigene41809 uagpf v2.0 377
AutoFact: RNA polymerase sigma factor [Arabidopsis thaliana] emb|CAA77213.1| sigma-like factor [Arabidopsis thaliana] dbj|BAA78109.1| RNA polymerase sigma subunit SigE [Arabidopsis thaliana] dbj|BAB11572.1| sigma-like factor [Arabidopsis thaliana] dbj|BAH19595.1| A 0.0
Blast2go: rna polymerase sigma factor rpod-like 0.0
unknown
uagpf_v2_unigene42107 uagpf v2.0 387
AutoFact: WRKY transcription factor, putative n=1 Tax=Ricinus communis RepID=B9S4T8_RICCO 0.0
Blast2go: protein 0.0
unknown
uagpf_v2_unigene42718 uagpf v2.0 360
AutoFact: Transcriptional factor B3; Auxin response factor [Medicago truncatula] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: auxin response 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain