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Assembly Name: uagpf v2.0

Name: transcription, DNA-dependent

Term: GO:0006351  Help

Source: GO from Blast2go

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene27663 uagpf v2.0 502
AutoFact: Unassigned protein
Blast2go: lysine-specific histone demethylase 1 homolog 3-like 3.85211e-09
unknown
uagpf_v2_unigene27730 uagpf v2.0 312
AutoFact: Actin related protein n=2 Tax=Malpighiales RepID=B9I2R4_POPTR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: actin-related protein 0.0
N-terminus
uagpf_v2_unigene28232 uagpf v2.0 1427
AutoFact: Heat stress transcription factor B-2b n=3 Tax=Oryza sativa RepID=HFB2B_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: heat shock factor protein 7 0.0
Putative N-terminus
uagpf_v2_unigene28526 uagpf v2.0 397
AutoFact: actin-related protein 5 [Arabidopsis thaliana] sp|Q940Z2.2|ARP5_ARATH RecName: Full=Actin-related protein 5 dbj|BAB03145.1| actin-like protein [Arabidopsis thaliana] gb|ACV53017.1| actin-related protein 5 [Arabidopsis thaliana] gb|ACV53018.1| actin-relate 0.0
FL-Next: tr=Actin; Larix gmelinii. 0.0
Blast2go: actin-related protein 5 0.0
Internal
uagpf_v2_unigene29699 uagpf v2.0 281
AutoFact: DNA-directed RNA polymerase n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RSV5_PHYPA 0.0
FL-Next: sp=DNA-directed RNA polymerase II subunit RPB1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna-directed rna polymerase iii subunit rpc1-like 0.0
Internal
uagpf_v2_unigene29953 uagpf v2.0 361
AutoFact: WRKY transcription factor PmWRKY119 (Fragment) n=4 Tax=Pinaceae RepID=E6Y3F1_PINMO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: wrky transcription factor 0.0
Internal
uagpf_v2_unigene30163 uagpf v2.0 405
AutoFact: Putative type-b response regulator (Sensor histidine kinase) n=1 Tax=Malus x domestica RepID=E4Z8Q8_MALDO 8.00001e-41
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: two-component response regulator arr2-like 1.00893e-43
Internal
uagpf_v2_unigene31186 uagpf v2.0 327
AutoFact: actin-related protein 5 [Arabidopsis thaliana] sp|Q940Z2.2|ARP5_ARATH RecName: Full=Actin-related protein 5 dbj|BAB03145.1| actin-like protein [Arabidopsis thaliana] gb|ACV53017.1| actin-related protein 5 [Arabidopsis thaliana] gb|ACV53018.1| actin-relate 0.0
FL-Next: Isoform 2 of Actin-related protein 5 OS=Arabidopsis thaliana GN=ARP5 0.0
Blast2go: actin-related protein 5 0.0
Internal
uagpf_v2_unigene31530 uagpf v2.0 292
AutoFact: DNA-directed RNA polymerase n=4 Tax=Oryza sativa RepID=B9G500_ORYSJ 8.0e-19
FL-Next: sp=DNA-directed RNA polymerase D subunit 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: nuclear rna polymerase d1a 1.55727e-21
Internal
uagpf_v2_unigene31870 uagpf v2.0 690
AutoFact: actin-related protein 5 [Arabidopsis thaliana] sp|Q940Z2.2|ARP5_ARATH RecName: Full=Actin-related protein 5 dbj|BAB03145.1| actin-like protein [Arabidopsis thaliana] gb|ACV53017.1| actin-related protein 5 [Arabidopsis thaliana] gb|ACV53018.1| actin-relate 0.0
FL-Next: Isoform 3 of Actin-related protein 5 OS=Arabidopsis thaliana GN=ARP5 0.0
Blast2go: actin-related protein 5 0.0
C-terminus
uagpf_v2_unigene31918 uagpf v2.0 983
AutoFact: RecName: Full=Protein HIRA; AltName: Full=Histone regulator protein emb|CAB88535.1| WD repeat domain protein [Arabidopsis thaliana] 0.0
FL-Next: sp=Protein HIRA; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: protein hira 0.0
C-terminus
uagpf_v2_unigene32353 uagpf v2.0 196
AutoFact: WRKY DNA-binding protein [Nicotiana tabacum] 0.0
Blast2go: probable wrky transcription factor 2-like 0.0
unknown
uagpf_v2_unigene32985 uagpf v2.0 226
AutoFact: GATA transcription factor, putative n=1 Tax=Ricinus communis RepID=B9RQG2_RICCO 0.0
Blast2go: protein 0.0
unknown
uagpf_v2_unigene33421 uagpf v2.0 388
AutoFact: HLH domain containing protein 4.0e-13
Blast2go: transcription factor bim1 0.0
unknown
uagpf_v2_unigene33672 uagpf v2.0 359
AutoFact: HLH domain containing protein 4.0e-13
Blast2go: transcription factor bim1 0.0
Coding
uagpf_v2_unigene34773 uagpf v2.0 250
AutoFact: DNA-directed RNA polymerase 1B, mitochondrial n=3 Tax=Nicotiana RepID=RPO1B_TOBAC 0.0
FL-Next: sp=DNA-directed RNA polymerase 2B, chloroplastic/mitochondrial; Nicotiana tabacum (Common tobacco). 0.0
Blast2go: t7 bacteriophage-type single subunit rna polymerase 0.0
Internal
uagpf_v2_unigene35033 uagpf v2.0 65
AutoFact: WRKY DNA-binding protein [Nicotiana tabacum] 0.0
Blast2go: probable wrky transcription factor 2-like 0.0
unknown
uagpf_v2_unigene35047 uagpf v2.0 92
AutoFact: ketose-bisphosphate aldolase class-II-like protein [Arabidopsis thaliana] gb|AAL60010.1| unknown protein [Arabidopsis thaliana] gb|AAM91809.1| unknown protein [Arabidopsis thaliana] gb|AEE29694.1| ketose-bisphosphate aldolase class-II-like protein [Arabid 0.0
FL-Next: tr=Fructose-bisphosphate aldolase, putative; Ricinus communis (Castor bean). 0.0
Blast2go: ketose-bisphosphate aldolase class-ii-like protein 0.0
Internal
uagpf_v2_unigene35083 uagpf v2.0 317
AutoFact: TPA_inf: class IV HD-Zip protein HDZ41 [Physcomitrella patens] 0.0
FL-Next: tr=Homeodomain protein HB2; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: homeodomain protein 0.0
Putative C-terminus
uagpf_v2_unigene35165 uagpf v2.0 794
AutoFact: WRKY transcription factor 1 (Fragment) n=1 Tax=Picea abies RepID=B2KZJ7_PICAB 0.0
Blast2go: transcription factor wrky 0.0
Putative coding

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain