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Assembly Name: uagpf v2.0

Name: nucleotide binding

Term: GO:0000166  Help

Source: GO from Blast2go

Ontology: Molecular Function

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
uagpf_v2_unigene5156 uagpf v2.0 590
• AutoFact: Unassigned protein
• Blast2go: protein 0.0
unknown
uagpf_v2_unigene5238 uagpf v2.0 1005
• AutoFact: Protein terminal ear1 homolog n=2 Tax=Oryza sativa RepID=EAR1_ORYSJ 9.80909e-45
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: terminal ear1 2.38221e-44
C-terminus
uagpf_v2_unigene5248 uagpf v2.0 713
• AutoFact: RecName: Full=Alpha-glucan water dikinase, chloroplastic; AltName: Full=Starch-related protein R1; Flags: Precursor gb|AAM18228.1| R1 [Citrus reticulata] 0.0
• Blast2go: alpha-glucan water chloroplastic-like 0.0
Putative coding
uagpf_v2_unigene5386 uagpf v2.0 758
• AutoFact: [RTKL] COG0515 Serine/threonine protein kinase 0.0
• Blast2go: atp binding 0.0
unknown
uagpf_v2_unigene5388 uagpf v2.0 1210
• AutoFact: RecName: Full=Splicing factor U2af large subunit B; AltName: Full=NpU2AF65b; AltName: Full=U2 auxiliary factor 65 kDa subunit B; AltName: Full=U2 small nuclear ribonucleoprotein auxiliary factor large subunit B; Short=U2 snRNP auxiliary factor large subun 0.0
• FL-Next: sp=Splicing factor U2af large subunit B; Nicotiana plumbaginifolia (Leadwort-leaved tobacco) (Tex-Mex tobacco). 0.0
• Blast2go: protein 0.0
Putative N-terminus
uagpf_v2_unigene5514 uagpf v2.0 975
• AutoFact: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain), putative [Oryza sativa Japonica Group] gb|ABA92375.1| RNA recognition motif family protein, expressed [Oryza sativa Japonica Group] gb|EEE51928.1| hypothetical protein OsJ_33542 [Oryza sativa Japoni 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: rna recognition motif-containing protein 0.0
N-terminus
uagpf_v2_unigene5572 uagpf v2.0 876
• AutoFact: DNA-damage-repair/toleration protein DRT111 [Arabidopsis thaliana] sp|P42698.2|DR111_ARATH RecName: Full=DNA-damage-repair/toleration protein DRT111, chloroplastic; Flags: Precursor gb|AAF19751.1|AC009917_10 Strong similarity to gi|1169200 DNA-Damage-Repa 0.0
• FL-Next: sp=DNA-damage-repair/toleration protein DRT111, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: dna-damage-repair toleration protein drt111 0.0
N-terminus
uagpf_v2_unigene5589 uagpf v2.0 715
• AutoFact: DNAJ heat shock N-terminal domain-containing protein [Arabidopsis thaliana] ref|NP_001031930.1| DNAJ heat shock N-terminal domain-containing protein [Arabidopsis thaliana] gb|AAM91576.1| putative protein [Arabidopsis thaliana] gb|AAP13437.1| At5g23590 [Ar 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: dnaj heat shock n-terminal domain-containing protein 0.0
C-terminus
uagpf_v2_unigene5596 uagpf v2.0 919
• AutoFact: translation initiation factor 3 subunit B [Arabidopsis thaliana] sp|Q9C5Z1.1|EIF3B_ARATH RecName: Full=Eukaryotic translation initiation factor 3 subunit B; Short=eIF3b; AltName: Full=eIF-3-eta; AltName: Full=eIF3 p110; AltName: Full=p82 gb|AAG53615.1|AF2 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: eukaryotic translation initiation factor 3 subunit b-like 0.0
N-terminus
uagpf_v2_unigene5639 uagpf v2.0 803
• AutoFact: Putative WEE1 kinase n=1 Tax=Nicotiana tabacum RepID=B6GV50_TOBAC 0.0
• FL-Next: sp=Wee1-like protein kinase; Oryza sativa subsp. japonica (Rice). 0.0
• Blast2go: wee1-like protein kinase 0.0
C-terminus
uagpf_v2_unigene5662 uagpf v2.0 499
• AutoFact: Eukaryotic translation initiation factor 3 subunit B n=1 Tax=Nicotiana tabacum RepID=EIF3B_TOBAC 5.0e-40
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: eukaryotic translation initiation factor 3 subunit b 0.0
N-terminus
uagpf_v2_unigene5693 uagpf v2.0 622
• AutoFact: transducin/WD40 domain-containing protein [Arabidopsis thaliana] dbj|BAE44475.1| WD repeat protein [Arabidopsis thaliana] gb|AEE85686.1| transducin/WD40 domain-containing protein [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
C-terminus
uagpf_v2_unigene5711 uagpf v2.0 575
• AutoFact: Phytochrome A-associated F-box protein, putative n=1 Tax=Ricinus communis RepID=B9SAQ8_RICCO 0.0
• Blast2go: phytochrome a-associated f-box protein 0.0
unknown
uagpf_v2_unigene5724 uagpf v2.0 912
• AutoFact: WD-repeat protein, putative n=1 Tax=Ricinus communis RepID=B9T1Y8_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ddb1- and cul4-associated factor 8-like 0.0
C-terminus
uagpf_v2_unigene5741 uagpf v2.0 565
• AutoFact: FCA gamma [Pisum sativum] 1.0e-17
• Blast2go: flowering time control protein fca-like 1.49858e-21
Coding
uagpf_v2_unigene5752 uagpf v2.0 588
• AutoFact: [R] COG0724 RNA-binding proteins (RRM domain) 5.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: rna recognition motif-containing protein 0.0
C-terminus
uagpf_v2_unigene5858 uagpf v2.0 620
• AutoFact: Leucine-rich repeat receptor protein kinase EXS, putative n=1 Tax=Ricinus communis RepID=B9RN04_RICCO 2.0e-22
• FL-Next: tr=Receptor protein kinase; Pinus sylvestris (Scots pine). 0.0
• Blast2go: leucine rich repeat receptor protein kinase 2 3.31871e-25
Internal
uagpf_v2_unigene5993 uagpf v2.0 370
• AutoFact: DNA damage-binding protein 2 [Arabidopsis thaliana] sp|Q6NQ88.1|DDB2_ARATH RecName: Full=Protein DAMAGED DNA-BINDING 2; AltName: Full=UV-damaged DNA-binding protein 2 gb|AAQ65193.1| At5g58760 [Arabidopsis thaliana] dbj|BAD42887.1| putative protein [Arabid 0.0
• Blast2go: protein damaged dna-binding 2 0.0
unknown
uagpf_v2_unigene6143 uagpf v2.0 670
• AutoFact: Os05g0427300 protein n=2 Tax=Oryza sativa RepID=Q0DI02_ORYSJ 4.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: rna recognition motif-containing protein 0.0
C-terminus
uagpf_v2_unigene6228 uagpf v2.0 443
• AutoFact: Glycine-rich RNA-binding protein n=4 Tax=Pinaceae RepID=Q9XEL4_PICGL 5.99994e-41
• FL-Next: tr=Glycine-rich RNA-binding protein; Picea glauca (White spruce) (Pinus glauca). 0.0
• Blast2go: glycine-rich rna-binding protein 0.0
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain