Sustainpine_db
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Assembly Name: uagpf v2.0

Name: nucleotide binding

Term: GO:0000166  Help

Source: GO from Blast2go

Ontology: Molecular Function


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene1698 uagpf v2.0 399
AutoFact: transducin/WD40 domain-containing protein [Arabidopsis thaliana] dbj|BAB02018.1| WD40-repeat protein [Arabidopsis thaliana] gb|AAL32514.1| WD40-repeat protein [Arabidopsis thaliana] gb|AAM47943.1| WD40-repeat protein [Arabidopsis thaliana] gb|AEE76041.1| 0.0
FL-Next: tr=Os01g0125800 protein; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: 66 kda stress protein 0.0
Internal
uagpf_v2_unigene1709 uagpf v2.0 1369
AutoFact: Prp8 binding protein [Arabidopsis thaliana] gb|AAB64029.1| putative splicing factor [Arabidopsis thaliana] gb|AAM13181.1| putative splicing factor [Arabidopsis thaliana] gb|AAP68267.1| At2g43770 [Arabidopsis thaliana] gb|AEC10322.1| Prp8 binding protein [ 0.0
FL-Next: sp=Protein Mut11; Chlamydomonas reinhardtii (Chlamydomonas smithii). 0.0
Blast2go: u5 small nuclear ribonucleoprotein 40 kda 0.0
Complete
uagpf_v2_unigene1713 uagpf v2.0 888
AutoFact: WD-40 repeat protein [Solanum lycopersicum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: wd40 repeat-containing protein smu1 0.0
C-terminus
uagpf_v2_unigene1761 uagpf v2.0 885
AutoFact: transducin/WD40 domain-containing protein [Arabidopsis thaliana] ref|NP_001078546.1| transducin/WD40 domain-containing protein [Arabidopsis thaliana] dbj|BAB10005.1| WD-repeat protein-like [Arabidopsis thaliana] gb|AAK96726.1| WD-repeat protein-like [Arab 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: wd repeat-containing protein 26-like 0.0
N-terminus
uagpf_v2_unigene1845 uagpf v2.0 585
AutoFact: receptor protein kinase, putative [Arabidopsis thaliana] 3.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: probable lrr receptor-like serine threonine-protein kinase at1g56130-like 4.2838e-36
C-terminus
uagpf_v2_unigene1873 uagpf v2.0 422
AutoFact: transducin/WD40 domain-containing protein [Arabidopsis thaliana] dbj|BAA77766.1| FAS2 [Arabidopsis thaliana] dbj|BAB11430.1| FAS2 [Arabidopsis thaliana] gb|AED97930.1| transducin/WD40 domain-containing protein [Arabidopsis thaliana] 0.0
FL-Next: sp=Protein HIRA; Zea mays (Maize). 0.0
Blast2go: transducin wd40 domain-containing protein 0.0
Internal
uagpf_v2_unigene2040 uagpf v2.0 727
AutoFact: regulatory associated protein of mTOR [Arabidopsis thaliana] sp|Q93YQ1.1|RTOR1_ARATH RecName: Full=Regulatory-associated protein of TOR 1; AltName: Full=Protein RAPTOR 1; AltName: Full=Protein RAPTOR 1B; Short=AtRaptor1b gb|AAL24320.1| Unknown protein [Ar 0.0
FL-Next: sp=Regulatory-associated protein of TOR 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: regulatory-associated protein of tor 1-like 0.0
C-terminus
uagpf_v2_unigene2082 uagpf v2.0 920
AutoFact: Ca(2+)-dependent DNase [Populus tomentosa] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dnase 2 0.0
C-terminus
uagpf_v2_unigene2151 uagpf v2.0 484
AutoFact: L-type lectin-domain containing receptor kinase IV.3 n=2 Tax=Arabidopsis RepID=LRK43_ARATH 2.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: concanavalin a-like lectin kinase-like protein 5.09024e-18
Putative C-terminus
uagpf_v2_unigene2265 uagpf v2.0 1323
AutoFact: WD-repeat protein, putative n=1 Tax=Ricinus communis RepID=B9SRX4_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
uagpf_v2_unigene2276 uagpf v2.0 375
AutoFact: Prp8 binding protein [Arabidopsis thaliana] gb|AAB64029.1| putative splicing factor [Arabidopsis thaliana] gb|AAM13181.1| putative splicing factor [Arabidopsis thaliana] gb|AAP68267.1| At2g43770 [Arabidopsis thaliana] gb|AEC10322.1| Prp8 binding protein [ 0.0
Blast2go: u5 small nuclear ribonucleoprotein 40 kda 0.0
unknown
uagpf_v2_unigene2314 uagpf v2.0 853
AutoFact: putative RNA-binding protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: heterogeneous nuclear ribonucleoprotein 0.0
C-terminus
uagpf_v2_unigene2372 uagpf v2.0 443
AutoFact: Os01g0367300 protein n=1 Tax=Oryza sativa Japonica Group RepID=Q5JJM4_ORYSJ 7.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: copper ion binding 3.29634e-21
Internal
uagpf_v2_unigene2460 uagpf v2.0 1622
AutoFact: [R] COG0724 RNA-binding proteins (RRM domain) 5.0e-08
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ctc-interacting domain 11 protein 0.0
Complete
uagpf_v2_unigene2575 uagpf v2.0 648
AutoFact: DNA repair protein XRCC3-like protein [Arabidopsis thaliana] ref|NP_851202.1| DNA repair protein XRCC3-like protein [Arabidopsis thaliana] sp|Q9FKM5.1|XRCC3_ARATH RecName: Full=DNA repair protein XRCC3 homolog; AltName: Full=X-ray repair cross-complementi 7.0e-36
FL-Next: sp=DNA repair protein XRCC3 homolog; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna repair protein xrcc3-like protein 2.10195e-44
Internal
uagpf_v2_unigene2578 uagpf v2.0 1118
AutoFact: ATP-binding cassette transporter, subfamily G, member 4, group WBC protein PpABCG4 n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SCA8_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: abc transporter g family member 22-like 0.0
C-terminus
uagpf_v2_unigene2652 uagpf v2.0 1113
AutoFact: RNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9SKE9_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: heterogeneous nuclear ribonucleoprotein q 0.0
N-terminus
uagpf_v2_unigene2707 uagpf v2.0 719
AutoFact: Nucleotide binding protein, putative n=1 Tax=Ricinus communis RepID=B9RDD1_RICCO 0.0
FL-Next: tr=Transducin family protein; Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress). 0.0
Blast2go: protein 0.0
N-terminus
uagpf_v2_unigene2810 uagpf v2.0 574
AutoFact: Phytosulfokine receptor, putative n=1 Tax=Ricinus communis RepID=B9SQH2_RICCO 0.0
FL-Next: tr=Receptor protein kinase; Pinus sylvestris (Scots pine). 0.0
Blast2go: phytosulfokine receptor 2-like 0.0
Internal
uagpf_v2_unigene2811 uagpf v2.0 759
AutoFact: transducin/WD-40 repeat-containing protein [Arabidopsis thaliana] gb|AAM13156.1| unknown protein [Arabidopsis thaliana] gb|AAN15609.1| unknown protein [Arabidopsis thaliana] gb|AEE29984.1| transducin/WD-40 repeat-containing protein [Arabidopsis thaliana] 0.0
FL-Next: sp=WD repeat-containing protein DWA2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: transducin family protein 0.0
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain