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Assembly Name: uagpf v2.0

Name: nucleotide binding

Term: GO:0000166  Help

Source: GO from Blast2go

Ontology: Molecular Function


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene29065 uagpf v2.0 217
AutoFact: exocyst complex component 5 [Arabidopsis thaliana] ref|NP_568270.3| exocyst complex component 5 [Arabidopsis thaliana] sp|Q8RVQ5.2|EXOC5_ARATH RecName: Full=Exocyst complex component 5; AltName: Full=Exocyst complex component Sec10 dbj|BAD95324.1| putativ 0.0
FL-Next: sp=Exocyst complex component 5; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: exocyst complex component 5 0.0
Internal
uagpf_v2_unigene29095 uagpf v2.0 369
AutoFact: Ubiquitin-activating enzyme E1, putative n=1 Tax=Ricinus communis RepID=B9STZ8_RICCO 0.0
FL-Next: sp=Adenylyltransferase and sulfurtransferase MOCS3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: sulfurtransferase mocs3 0.0
C-terminus
uagpf_v2_unigene29196 uagpf v2.0 267
AutoFact: FCA gamma [Pisum sativum] 0.0
Blast2go: rna binding abscisic acid binding protein 0.0
Coding
uagpf_v2_unigene29350 uagpf v2.0 720
AutoFact: RNA recognition motif-containing protein [Arabidopsis thaliana] ref|NP_974317.1| RNA recognition motif-containing protein [Arabidopsis thaliana] dbj|BAA97064.1| unnamed protein product [Arabidopsis thaliana] gb|AAL36202.1| putative RNA-binding protein [Ar 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
N-terminus
uagpf_v2_unigene29672 uagpf v2.0 368
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_21.assembly12x (Fragment) n=3 Tax=Vitis vinifera RepID=D7SM13_VITVI 0.0
Blast2go: rna binding 0.0
Coding
uagpf_v2_unigene29683 uagpf v2.0 527
AutoFact: WD40 domain-containing protein [Arabidopsis thaliana] gb|AAK32933.1|AF367346_1 At2g20330/F11A3.12 [Arabidopsis thaliana] gb|AAL16252.1|AF428322_1 At2g20330/F11A3.12 [Arabidopsis thaliana] gb|AAD21755.1| putative WD-40 repeat protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: wd repeat-containing protein 70-like 0.0
C-terminus
uagpf_v2_unigene29704 uagpf v2.0 421
AutoFact: exocyst complex component 5 [Arabidopsis thaliana] ref|NP_568270.3| exocyst complex component 5 [Arabidopsis thaliana] sp|Q8RVQ5.2|EXOC5_ARATH RecName: Full=Exocyst complex component 5; AltName: Full=Exocyst complex component Sec10 dbj|BAD95324.1| putativ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: exocyst complex component 5 0.0
N-terminus
uagpf_v2_unigene29820 uagpf v2.0 344
AutoFact: transducin/WD-40 repeat-containing protein [Arabidopsis thaliana] gb|AAL86002.1| unknown protein [Arabidopsis thaliana] gb|AAN71963.1| unknown protein [Arabidopsis thaliana] gb|AEE35239.1| transducin/WD-40 repeat-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: angio-associated migratory cell 0.0
N-terminus
uagpf_v2_unigene29885 uagpf v2.0 800
AutoFact: translation initiation factor 3 subunit B [Arabidopsis thaliana] sp|Q9C5Z1.1|EIF3B_ARATH RecName: Full=Eukaryotic translation initiation factor 3 subunit B; Short=eIF3b; AltName: Full=eIF-3-eta; AltName: Full=eIF3 p110; AltName: Full=p82 gb|AAG53615.1|AF2 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: eukaryotic translation initiation factor 3 subunit b-like 0.0
C-terminus
uagpf_v2_unigene30011 uagpf v2.0 386
AutoFact: transducin/WD40 domain-containing protein [Arabidopsis thaliana] dbj|BAA77766.1| FAS2 [Arabidopsis thaliana] dbj|BAB11430.1| FAS2 [Arabidopsis thaliana] gb|AED97930.1| transducin/WD40 domain-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: transducin wd40 domain-containing protein 0.0
N-terminus
uagpf_v2_unigene30169 uagpf v2.0 520
AutoFact: glutamate-ammonia ligase-like protein [Arabidopsis thaliana] gb|AEE79045.1| glutamate-ammonia ligase-like protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Glutamine synthetase I; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
Blast2go: protein 0.0
C-terminus
uagpf_v2_unigene30178 uagpf v2.0 318
AutoFact: RRM_1 domain containing protein 6.0e-05
Blast2go: zinc finger ccch domain-containing protein 18-like 0.0
unknown
uagpf_v2_unigene30340 uagpf v2.0 350
AutoFact: RRM_1 domain containing protein 6.0e-05
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: zinc finger ccch domain-containing protein 18-like 0.0
Internal
uagpf_v2_unigene30401 uagpf v2.0 187
AutoFact: Multidrug resistance-associated protein 2, 6 (Mrp2, 6), abc-transoprter, putative n=1 Tax=Ricinus communis RepID=B9SAP4_RICCO 0.0
FL-Next: sp=ABC transporter C family member 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: multidrug resistance protein abc transporter family 0.0
Internal
uagpf_v2_unigene30677 uagpf v2.0 369
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transducin wd-40 repeat-containing protein 2.41111e-17
Putative N-terminus
uagpf_v2_unigene30828 uagpf v2.0 345
AutoFact: Signal Transduction Histidine Kinase (STHK) with CheB and CheR activity n=1 Tax=Cyanothece sp. CCY0110 RepID=A3IKI3_9CHRO 4.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: sensory histidine protein kinase 0.0
Internal
uagpf_v2_unigene30845 uagpf v2.0 381
AutoFact: heterogeneous nuclear ribonucleoprotein R [Gallus gallus] ref|XP_003212536.1| PREDICTED: heterogeneous nuclear ribonucleoprotein R-like [Meleagris gallopavo] 4.0e-19
FL-Next: tr=Putative uncharacterized protein Sb08g019140; Sorghum bicolor (Sorghum) (Sorghum vulgare). 0.0
Blast2go: heterogeneous nuclear ribonucleoprotein r 0.0
Internal
uagpf_v2_unigene30970 uagpf v2.0 285
AutoFact: similar to beta-transducins (Pfam: PF00400, Score=71.7, E=1.5e-17, N=6) [Arabidopsis thaliana] emb|CAB81036.1| putative WD-repeat membrane protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: wd-repeat membrane protein 0.0
Internal
uagpf_v2_unigene31158 uagpf v2.0 206
AutoFact: DNA helicase recq1, putative n=1 Tax=Ricinus communis RepID=B9S1J8_RICCO 0.0
Blast2go: atp-dependent dna helicase q-like 2 0.0
Coding
uagpf_v2_unigene31247 uagpf v2.0 234
AutoFact: Nucleotide-binding protein-like n=4 Tax=Andropogoneae RepID=B6TU02_MAIZE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: atp binding 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain