Sustainpine_db
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Assembly Name: uagpf v2.0

Name: nucleotide binding

Term: GO:0000166  Help

Source: GO from Blast2go

Ontology: Molecular Function

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
uagpf_v2_unigene18629 uagpf v2.0 392
• AutoFact: P-loop containing nucleoside triphosphate hydrolase-like protein n=6 Tax=Arabidopsis RepID=F4I5A3_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: p-loop containing nucleoside triphosphate hydrolase-like protein 0.0
C-terminus
uagpf_v2_unigene18888 uagpf v2.0 370
• AutoFact: RNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9SKE9_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: heterogeneous nuclear ribonucleoprotein q 0.0
Internal
uagpf_v2_unigene18900 uagpf v2.0 302
• AutoFact: RNA recognition motif-containing protein [Arabidopsis thaliana] dbj|BAC42069.1| unknown protein [Arabidopsis thaliana] gb|AEE75401.1| RNA recognition motif-containing protein [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: rna recognition motif-containing protein 0.0
C-terminus
uagpf_v2_unigene18975 uagpf v2.0 805
• AutoFact: Os01g0367300 protein n=1 Tax=Oryza sativa Japonica Group RepID=Q5JJM4_ORYSJ 7.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: copper ion binding 3.29634e-21
C-terminus
uagpf_v2_unigene19020 uagpf v2.0 689
• AutoFact: heterogeneous nuclear ribonucleoprotein R [Gallus gallus] ref|XP_003212536.1| PREDICTED: heterogeneous nuclear ribonucleoprotein R-like [Meleagris gallopavo] 4.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: heterogeneous nuclear ribonucleoprotein r 0.0
Putative Complete
uagpf_v2_unigene19091 uagpf v2.0 349
• AutoFact: 26S protease regulatory subunit 10B homolog A n=2 Tax=Arabidopsis RepID=PS10A_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: 26s protease regulatory subunit 0.0
C-terminus
uagpf_v2_unigene19165 uagpf v2.0 1077
• AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_21.assembly12x (Fragment) n=3 Tax=Vitis vinifera RepID=D7SM13_VITVI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: rna binding 0.0
C-terminus
uagpf_v2_unigene19284 uagpf v2.0 424
• AutoFact: Glycine-rich RNA-binding protein n=4 Tax=Pinaceae RepID=Q9XEL4_PICGL 5.99994e-41
• Blast2go: glycine-rich rna-binding protein 0.0
unknown
uagpf_v2_unigene19427 uagpf v2.0 1065
• AutoFact: Splicing factor-like protein n=3 Tax=Vitis RepID=Q6R4Q7_VITRI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: arginine serine-rich-splicing factor rsp40 0.0
C-terminus
uagpf_v2_unigene19435 uagpf v2.0 816
• AutoFact: putative DNA binding protein [Trifolium pratense] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: rna-binding post-transcriptional regulator csx1-like 0.0
Internal
uagpf_v2_unigene19489 uagpf v2.0 1124
• AutoFact: ADP-ribosylation factor [Medicago sativa] emb|CAI29265.1| ADP-ribosylation factor 1 [Medicago truncatula] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: adp-ribosylation factor 0.0
Complete
uagpf_v2_unigene19536 uagpf v2.0 839
• AutoFact: RNA recognition motif-containing protein [Arabidopsis thaliana] ref|NP_001030873.1| RNA recognition motif-containing protein [Arabidopsis thaliana] gb|AAR23731.1| At3g56510 [Arabidopsis thaliana] gb|AAS68115.1| At3g56510 [Arabidopsis thaliana] dbj|BAF0014 0.0
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: rna recognition motif-containing protein 0.0
C-terminus
uagpf_v2_unigene19566 uagpf v2.0 2062
• AutoFact: putative ribosomal-protein S6 kinase-like protein [Solanum lycopersicum] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
N-terminus
uagpf_v2_unigene19593 uagpf v2.0 1519
• AutoFact: putative RNA binding protein [Nicotiana tabacum] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
C-terminus
uagpf_v2_unigene19601 uagpf v2.0 897
• AutoFact: Os05g0427300 protein n=2 Tax=Oryza sativa RepID=Q0DI02_ORYSJ 4.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: rna recognition motif-containing protein 0.0
N-terminus
uagpf_v2_unigene19625 uagpf v2.0 933
• AutoFact: U2 snrnp auxiliary factor, small subunit, putative n=1 Tax=Ricinus communis RepID=B9SRG2_RICCO 0.0
• Blast2go: u2 snrnp auxiliary small 0.0
unknown
uagpf_v2_unigene19697 uagpf v2.0 1236
• AutoFact: DNA binding protein ACBF-like [Solanum tuberosum] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: nuclear acid binding 0.0
C-terminus
uagpf_v2_unigene19889 uagpf v2.0 1031
• AutoFact: putative DNA binding protein [Trifolium pratense] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: rna-binding post-transcriptional regulator csx1-like 0.0
C-terminus
uagpf_v2_unigene25043 uagpf v2.0 528
• AutoFact: P-loop containing nucleoside triphosphate hydrolase-like protein n=6 Tax=Arabidopsis RepID=F4I5A3_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: p-loop containing nucleoside triphosphate hydrolase-like protein 0.0
Internal
uagpf_v2_unigene25059 uagpf v2.0 405
• AutoFact: transducin/WD-40 repeat-containing protein [Arabidopsis thaliana] gb|AAL86002.1| unknown protein [Arabidopsis thaliana] gb|AAN71963.1| unknown protein [Arabidopsis thaliana] gb|AEE35239.1| transducin/WD-40 repeat-containing protein [Arabidopsis thaliana] 0.0
• Blast2go: angio-associated migratory cell 0.0
unknown

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain